KEGG   Telmatherina bonti: 306755408
Entry
306755408         CDS       T12083                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tbt  Telmatherina bonti
Pathway
tbt03030  DNA replication
tbt03410  Base excision repair
tbt03420  Nucleotide excision repair
tbt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tbt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    306755408 (rfc2)
   03410 Base excision repair
    306755408 (rfc2)
   03420 Nucleotide excision repair
    306755408 (rfc2)
   03430 Mismatch repair
    306755408 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbt03032]
    306755408 (rfc2)
   03036 Chromosome and associated proteins [BR:tbt03036]
    306755408 (rfc2)
   03400 DNA repair and recombination proteins [BR:tbt03400]
    306755408 (rfc2)
DNA replication proteins [BR:tbt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    306755408 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    306755408 (rfc2)
Chromosome and associated proteins [BR:tbt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    306755408 (rfc2)
DNA repair and recombination proteins [BR:tbt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     306755408 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    306755408 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid nSTAND_NTPase5 AAA_22 AAA_14 AAA_16 Viral_helicase1 AAA_11 Rad17 Mg_chelatase AAA_assoc_2 DEAD RuvB_N AAA_19 nSTAND3 MipZ AAA_5 AAA_18 DNAX_ATPase_lid AAA_24 ABC_tran AAA_28 AAA_23 AAA_30 AAA_25 RNA_helicase MeaB NTPase_1 SLFN-g3_helicase AAA_2 MCM DUF815 IstB_IS21 PPR_1 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 306755408
NCBI-ProteinID: XP_079095905
LinkDB
Position
4:complement(7275572..7297776)
AA seq 350 aa
MDVEMEETESVQKTDTDAGESSSKSSGSSYELPWVEKYRPLKLDQIVGNEETVSRLEVFS
REGNVPNIIIAGPPGTGKTTSILCLARALLGSTMKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSR
CAVLRYSKLTDGQILARLQEVVEKERLSVSDDGLEAIIFTAQGDMRQALNNLQSTNSGFG
YINSENVFKVCDEPHPLLVKSMLGHCVEGNIDEAYKVVERLWALGYSPEDIIGNIFRVCK
TFQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAAPAAS
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggacgtggagatggaagagacagaaagtgtgcagaaaaccgacaccgatgccggcgag
tcatcgtctaaaagctccgggagctcatatgagcttccctgggtggagaaataccggccg
ctgaagctggaccagatcgtgggaaacgaggagacggtgagccggctggaggtgttctcc
agggagggaaatgttcccaacatcatcatagcaggtcctcctggcacagggaagaccacc
agcatcctgtgtttggcccgagctctgctgggatccaccatgaaggacgccgtgctggag
ctgaacgcctccaacgacagggggattgatgtggtgaggaacaagataaagatgtttgct
cagcagaaagtcacacttcccaaaggccgacacaagatcatcatcctggatgaagctgac
agcatgacagacggagctcagcaggcgctgaggaggatcatggagatctactccaagacg
acgcgcttcgctctggcctgcaacgcctcagataagatcatcgagccgatccagtcccgc
tgcgccgtgctgcgatactccaagctgacggacgggcagatccttgcccggctgcaggag
gtggtggagaaggagcgcttgtctgtgtccgatgacgggctggaggccatcatcttcacc
gctcagggagacatgagacaggcgctgaacaacctgcagtccaccaactccggcttcggc
tacatcaacagtgagaacgtgttcaaagtgtgtgacgagccccaccccctgctggtgaag
agcatgctgggacactgcgtggaggggaacatcgacgaggcctacaaggtggtggagcgg
ctgtgggcgctgggctactccccggaggacatcatcggaaacatcttcagggtctgcaag
accttccagatggccgagtacctgaagctggagttcatcaaggagatcggatacactcac
atgcgtgtggctgaaggcgtcaactccctgctgcagatggccggtttgctgggacgcctc
tgcagcaagacggcggcccccgctgcaagctga

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