Telmatherina bonti: 306758705
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Entry
306758705 CDS
T12083
Symbol
LOC306758705
Name
(RefSeq) putative flap endonuclease 1 homolog
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
tbt Telmatherina bonti
Pathway
tbt03030
DNA replication
tbt03410
Base excision repair
tbt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
306758705 (LOC306758705)
03410 Base excision repair
306758705 (LOC306758705)
03450 Non-homologous end-joining
306758705 (LOC306758705)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbt03032
]
306758705 (LOC306758705)
03400 DNA repair and recombination proteins [BR:
tbt03400
]
306758705 (LOC306758705)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tbt04147
]
306758705 (LOC306758705)
DNA replication proteins [BR:
tbt03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
306758705 (LOC306758705)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
306758705 (LOC306758705)
DNA repair and recombination proteins [BR:
tbt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
306758705 (LOC306758705)
Exosome [BR:
tbt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
306758705 (LOC306758705)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
XPG_I_2
C5orf34_2nd
HHH_5
WIV_2
Motif
Other DBs
NCBI-GeneID:
306758705
NCBI-ProteinID:
XP_079100207
LinkDB
All DBs
Position
7:complement(35613712..>35625793)
Genome browser
AA seq
346 aa
AA seq
DB search
MGITKLADLIRSDAPEAISHKDISAYTGKVIALDTSIVMNQFRAATPTLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPVEKTAVLEKRAEAAGWNAPKCTGSASSQTKDCLELLKLLGVP
VIQAPGDAEGLCARLVKERIVDAVASEDMDTLPFGANILIRQLNAKKDSDVVEYSLPKIL
EKLQINHEELVDLCILLGCDYCDKIPGLGPKRALTLIQKHRTIENVVLHINRETYPVPHF
WKYKEARKIFLDAAKTSVPELVWSEPDEEALVGFLCHIKRTKEERVRRRMEKFREKRENI
RNERKKENKAEGSKQTRIKDFYTVTRKRNHPVEVTPSISGNKKRKR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggggatcactaaactggctgatttgatccgatcagatgctcctgaagccatttctcac
aaggacatcagcgcctacacaggaaaagttatcgcgctggatacttccattgtcatgaac
cagttccgagcagcaacaccaactcttagccccctgactggtctcttcttccgcacactc
accttcctggaacatgacataaagcctgtctttgtgtttgacggaaagcctcctgtggaa
aaaaccgctgttcttgagaagcgagctgaagcagctggctggaacgcccccaaatgtaca
ggctcagcgtcctcccagaccaaagattgcctggagctcttgaagcttctgggtgtgcct
gtcatccaggctccaggggacgccgagggcctttgcgcccggctggtgaaagagaggatt
gttgacgccgtggcatcggaagacatggacacgttgccctttggagcgaatattctcatt
cgccagctcaatgccaagaaggacagtgatgtggttgaatattccttacccaagatcttg
gaaaaactccagattaatcatgaggagcttgttgacctctgcattttgctgggttgtgac
tactgtgacaaaatacctggtttgggtcctaagagagctctaacactgatccagaagcat
cgaactattgagaacgtggttttgcacattaacagagagacctatcctgttccacatttt
tggaaatacaaagaagcaaggaaaatcttcttggatgcagctaaaacctcagttcctgaa
ctggtgtggtctgagccagatgaagaagccttggttgggttcctctgtcacatcaaacgc
acaaaagaggagagggtccgtcggcgaatggaaaagtttcgtgagaagcgggaaaacatt
cggaacgaaaggaagaaagagaataaagctgaaggcagcaagcagactcgcataaaggac
ttctacacagttaccaggaagaggaatcatcctgtggaagttacaccttcaatcagtgga
aataaaaagagaaaacgataa
DBGET
integrated database retrieval system
