Telmatherina bonti: 306759350
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Entry
306759350 CDS
T12083
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
tbt Telmatherina bonti
Pathway
tbt03030
DNA replication
tbt03410
Base excision repair
tbt03420
Nucleotide excision repair
tbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
306759350 (rfc4)
03410 Base excision repair
306759350 (rfc4)
03420 Nucleotide excision repair
306759350 (rfc4)
03430 Mismatch repair
306759350 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbt03032
]
306759350 (rfc4)
03036 Chromosome and associated proteins [BR:
tbt03036
]
306759350 (rfc4)
03400 DNA repair and recombination proteins [BR:
tbt03400
]
306759350 (rfc4)
DNA replication proteins [BR:
tbt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
306759350 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
306759350 (rfc4)
Chromosome and associated proteins [BR:
tbt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
306759350 (rfc4)
DNA repair and recombination proteins [BR:
tbt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
306759350 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
306759350 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_11
AAA_16
AAA_22
Mg_chelatase
Gp44_lid
AAA_30
DUF815
SLFN-g3_helicase
Cdc6_lid
RuvB_N
AAA_14
DNAX_ATPase_lid
AAA_19
AAA_24
ResIII
DNA_pol3_gamma3
Kinesin
DUF2760
AAA_7
AAA_28
AAA_5
Motif
Other DBs
NCBI-GeneID:
306759350
NCBI-ProteinID:
XP_079101092
LinkDB
All DBs
Position
8:complement(36574199..36584732)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATVQTSKLQKDKTKAGPSGEKKAKAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELFGPDLYRQRVLELNASDERGIQVIREKVKN
FAQLTVSGSRPDGKPCPPFKIIILDEADSMTGPAQAALRRSMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEQRLLDICEKENLKYTKESIAALVRVSEGDLRKAITFL
QSAARLNADKEITDQTVTEIAGVVPSKMIDDLFQTSSRGTFEKLEVVVRRMMEDGYAATQ
ILNQLHDAVIEQDLKDEQKSAIAEKMAVVSKCLSDGADEYLQMLSLCSVIMQQASHG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaaaggagcaactgtccaaacaagcaaacttcagaaggacaagacc
aaagcaggaccaagcggagagaagaaggctaaagctgttccctgggtcgagaaataccga
ccaaagtgtgttgatgaggtggcgttccaggaggaggttgttgctgtgctgaagaagtct
ttggaaggagccgatcttcccaacctgctcttctacggccctcctgggacgggcaagacg
tccaccatcttagcagctgccagggagcttttcggtccggacctgtacagacagagggtg
ctggagctgaacgcctcggacgaacgaggcatccaggtcatcagagagaaagtgaagaac
ttcgctcagctcaccgtgtcggggagtcgtccagatgggaagccgtgtcctcccttcaag
atcatcatcctggatgaggcggactcgatgacgggaccggcgcaggcggccctcaggcgc
tccatggagaaagagtcccgcaccacccgcttctgcctcatctgtaactacatcagcaga
atcatcgagcctctgacctccagatgctccaagtttcgtttcaaacctttagccaatcag
atccaagagcagcgtctgctggacatctgcgagaaggagaacctgaagtacaccaaggag
agcatcgcggcgctggtgcgggtgtcggagggggatctacggaaagccatcacgtttctt
cagagcgccgctcgactcaatgctgacaaagaaatcaccgatcagaccgtcactgaaatc
gcaggggttgtcccgtccaagatgatcgacgacctgttccagaccagttctagaggaacg
tttgagaaactggaggtcgtggtgagaaggatgatggaggacggatacgcggccacacag
atcctgaatcagctccacgatgccgtcatagagcaggacctcaaggacgagcagaagtcc
gccatcgctgagaagatggcggttgtgagtaagtgcctgtcagacggagcggatgaatac
ctccagatgttgagtttgtgttcagtcatcatgcagcaggcctcccacggttag
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integrated database retrieval system