Telmatherina bonti: 306764270
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Entry
306764270 CDS
T12083
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
tbt Telmatherina bonti
Pathway
tbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
306764270 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbt03019
]
306764270 (skic3)
Messenger RNA biogenesis [BR:
tbt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
306764270 (skic3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_14
TPR_17
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_9
ANAPC3
TTC22_N
TPR_7
Fis1_TPR_C
CABIN1_N
TPR_15
TPR_COPA_B
COG4_N
DUF1024
TPR_Psidin_N
Motif
Other DBs
NCBI-GeneID:
306764270
NCBI-ProteinID:
XP_079107492
LinkDB
All DBs
Position
13:complement(23199292..23215629)
Genome browser
AA seq
1571 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEYKEALKHCKTVLKLEKNNYNAWVFIGLAASELEQPDQSQ
TAYKKAVELDPDQLLAWQGLANLYEKTDQWDFKEELPNVYQKLVDLYASSDKNKCCEVIK
KLSDIYCSDKEYDKLAKVWIQLVQLKEEDAVDKKELVQLLQQMIQLLSNCINEEEQDCEA
EKHLISAFEKAMVLIEPVPGEEHRKVSSDYIKCLSKLPHEEAKMKEACRSMLALYPSQSY
PLEILCSHYLNTGNMDEDAASAFTQLLDLVPNSGLGRLGLGTIALQEGRYTDAIKDLAQG
LKTTSLTAGWFTLAEAQFKVHRYSDSATSCSQGLNVCSSEDKKLRVKLLTLKFEALVRSK
GEKTADEAFETFSQIPEADKDPMLLALKGRGYLNKGQIDQAHKLSSELVASNPSLGQALA
LEGLVHLAEGQQQLAEQSFLKASSQNPDSGEYFFLLGQLYWDMGEETRKDRSKTHTHLLK
AAKLDPHLGCAFRYLGHYYREVAHDNGRAQGCYKKAFQLNSDDAESGAASVDLSMGQGDM
DTALTILQSVIEKATPGSAKWAWMRRGLYYLKIGEHQKAIADLQASLRADPDDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKYKEAVAEYLQITTHQDY
VPALKGLGECQLSLAKSLLEDCRDGGAIDLIQQAIENLFRAVQLRPDLSCLWKLLGDACT
AVSTVSPKRAQVVVPTLLSGFDSSMQSHILNQAQTLKVGERCYVHALKLMPEVPSLWYDL
GLNYYHQAACLPSITEGDENSACQDLEKAQQCLKKATMMDSSNHTFWNALGVISMIKGLG
NYSLAQHCFIKSIQVEPNNVVAWTNLGALYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQ
ALIAESVGSYDTMDLFRHTTELSTHTEGVKGYAYWVCSILLDQSNRDTELYSYNIIQMNA
ISAAHVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSMSSPGELTF
SLGSYGRALCNSGQWEEAVHAYNSTLLQELSDLVGLALAYCRAGLFSESSSAYERALAVA
STEKEKAYILTALAMLQHRQGNLDSAKTLLFKCSALKEPVPESLLCLCALGLVHGDTTLA
AAALTELLKQGSASGTVVEQHCLLTCTLLALQGNYSAVQREASRAVHRNPGNPSLWALLS
RVVPQYYPRKANGGAVAGHIACLSSMMQGKRALLYSGVNQLACGRHSGEDSHRNALKTMQ
RATLLCPDDPATWAGLMAACHTENTACYLSGSAPHRLSLQQILMSVVSEKVHSVEEIERP
LAQSLEGWVLQQAVAGLMMEGQLDKAEALCTQVLNVSPEHPAVMLSLRQVQYQRLLMANE
GAILVDPVLEQLNKAVMMNPTNLGAWHWLAEVYRSQGLLVQGVMAYRQSLQIALQLGMHS
FQVASLLRLALLALGPCMAGVPGNDWKELVMEATTETLKLDASPVALLFQALLHYVTKMA
ARETRRLLERLVYVPSQDVPVTVMQVARWYLLRHLHAKNDQELVDVLLQNAKKNEDQRLL
EFHSLLNNSST
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaagaagtgaaagctgcactgaaaagtgccagagaggctattaaaaacaaa
gaatataaagaggctctaaagcactgcaagaccgttttaaagctcgagaagaacaattac
aatgcatgggtattcattggtttggcagccagtgagctggaacagccagaccaatcacag
acagcctataagaaagcagtggagttggatccagatcagctgctggcctggcagggccta
gcaaatctctatgaaaagactgatcagtgggatttcaaagaggagctgccaaatgtttac
cagaagctggtggacctgtatgcaagttcggataaaaacaaatgttgtgaagtgattaaa
aagctgtctgacatttattgctctgacaaggaatatgataagttggcaaaagtttggatt
cagctggttcagctgaaggaggaagatgcagtagataagaaggaactggttcagctgctg
caacaaatgatccagcttttatcaaactgcattaatgaggaggagcaggactgtgaagct
gaaaaacatttgatatcagcgtttgagaaggctatggttctcattgaacctgtaccagga
gaggaacacagaaaggtctcatcagactatatcaaatgtctttctaaactgccacatgaa
gaagctaaaatgaaagaggcatgccggtccatgctggcactctaccccagccaaagttat
cctctagagatcctttgtagccactacctcaatacaggtaacatggatgaggatgctgct
agcgctttcactcagctcctggatttggtccccaacagtggattaggtcgcttgggtttg
ggtaccatagcattgcaagaaggaagatatacagatgccattaaggacctggcacaagga
ctgaagacaactagcttaacagctggatggtttactctggctgaggctcagtttaaagtg
cacagatactctgatagtgctacatcatgctctcaaggtttgaatgtatgttcttctgaa
gacaagaagctgagggtcaaactgcttacactgaagttcgaggccttagtgagaagtaaa
ggagagaagactgcagacgaggcttttgagacgttttcacagattccagaggcggacaaa
gacccgatgctgttagccttaaaaggccgtgggtacctcaacaaaggacagattgatcaa
gcacataagctgtcttcagagctggtggcctccaacccaagcctgggccaggcattggct
ctggaaggactggtacatttagctgaaggccagcagcagctggcagagcagagcttccta
aaggcttcaagccagaatccagacagtggagaatatttctttttgcttggacaactctat
tgggacatgggggaagagactcgtaaagaccggagcaaaacccatacacacttgttaaag
gctgcaaagttggatccacaccttggttgtgcatttcgctatcttgggcattattatcgg
gaggtagcacatgataatggccgtgcacaaggctgctataagaaggcttttcaattaaac
agtgatgatgcagagtctggagctgcatcagtggatctcagcatggggcagggggatatg
gacactgccttaacaattcttcagtcagtcatagagaaagccactccaggttctgcaaaa
tgggcctggatgagacgaggcctatattacctgaaaattggagaacatcaaaaggctata
gctgacttgcaggcatctttgagagcagaccctgacgactgggtgtgctgggagtgttta
ggtgaggcttatctaaaccggaggagcttcacagcagctctgaaggcctttggcaaggcc
catcaactgcagcccagctccatctacagtgtttatcaagcagctgcaatcaaacagacg
cttggtaaatacaaagaggcagttgcagagtacctgcaaatcacaacacaccaggactac
gttcctgctctcaaaggccttggggagtgccagctgtctcttgccaaaagcttactggag
gactgcagagatggaggagccattgacctcattcagcaagctatagagaacctcttcaga
gctgtgcagctgcgaccggacctgtcgtgtctgtggaagctgctgggagatgcttgcaca
gcagttagcactgtttcaccaaagagagcacaagttgtagtgccaaccttactgtccggt
ttcgactccagcatgcaaagccacatactgaaccaggcccagacgcttaaagttggtgag
aggtgctacgttcacgctttaaagctgatgcctgaggttcccagcctttggtatgatctt
gggctcaattattaccaccaggctgcctgcctgccttccatcacagagggagacgagaac
tctgcatgtcaggacctggagaaagcccagcagtgtctcaaaaaggctactatgatggac
agtagcaaccatactttctggaatgccctaggagtgatttctatgatcaaaggtttggga
aactattctctggctcagcattgcttcatcaagtccatacaagttgagccaaataatgtt
gtagcttggacaaaccttggagctctgtatttaaagaaggacaatatagagcttgcacat
gaggcctttaagattgctcagtctctcgaacctctgtatgtcaactgctggattggacag
gctctgatagcagaaagcgtgggaagctatgacaccatggatcttttcaggcacaccact
gaacttagcacacacacggagggagtgaaaggttatgcctactgggtttgttccatcctt
ctagatcaaagcaatagagacactgagctgtactcctacaacattattcagatgaatgcc
atttctgctgctcacgttgcactcagcaagtacacagagagaattcagtcagacccagat
gcctttattatgctgggttaccttaatgagcatctgcagctgaagagacaggccttacag
gcgtaccaaagggcagttgaactgcttcagtctatgtcttctcctggagagctgacattt
tctcttggaagttatggccgtgctttgtgtaactcaggccagtgggaagaagcagtgcat
gcttataattccactcttctgcaggagctcagtgacctggttggtctggctctggcctac
tgcagagctggtctcttttcagaaagcagcagtgcatatgagcgtgccttggctgttgct
tccactgagaaggagaaggcttacatattgactgctctggctatgctgcagcaccggcag
ggtaacctggactcagccaaaactctgctttttaaatgctcagcattgaaggagccagtt
ccagagtctttgctttgtttatgtgctcttggtttggtccatggtgatacgacacttgct
gctgctgccctgaccgagctgctaaaacaaggatcagcttcagggactgttgtggagcag
cactgtctgctcacctgcaccttgctggctctgcagggcaattacagtgctgtacaaaga
gaggcctccagagctgtgcacagaaaccctggaaatccgtctctctgggctcttctgtca
agagtggtaccacagtactatcctagaaaggcaaatggtggtgcagttgctggccacatt
gcttgtctttccagtatgatgcaaggaaagagggcattgttgtacagtggagtgaaccag
ctggcctgtgggagacattctggcgaggacagtcacaggaatgcactgaagactatgcag
agagccacgctgctctgtccagatgatccagcaacatgggcaggtttgatggctgcttgt
cacactgaaaacactgcctgttatctctctggttctgctcctcacagactgtccctacag
caaatcctcatgtcagtggtctctgagaaagtgcatagtgttgaggagatagaacggcct
ctagcacagtctctggaaggctgggtactgcaacaggctgttgctggtctcatgatggag
gggcagctggataaggctgaagccctctgcacacaggttctgaatgtgtcccccgaacac
cctgcagtgatgttgtcactaaggcaggtacagtaccagcgccttctcatggctaatgaa
ggtgctattctggtagaccctgtgttggagcagctcaacaaagctgtgatgatgaatccc
accaaccttggggcatggcattggctggctgaagtgtatcgtagccagggcttgctggtg
cagggagtaatggcttacaggcagagtctgcaaatagccttgcagcttggcatgcacagc
ttccaggtagccagtctgcttcgacttgctctgctagctctaggaccctgtatggctggt
gtccctggaaatgactggaaggagctggtgatggaagcaactactgagactttaaagctg
gacgcttctcctgtggccctcctgttccaggctctactccattatgtgaccaagatggct
gctagggaaactaggcggttgttggagaggctggtttatgttccatctcaagacgtcccc
gtgacggtgatgcaggtagccaggtggtatctccttagacacctgcatgccaagaatgat
caggaacttgttgatgttcttttgcaaaatgccaaaaagaatgaagatcaaagactgctg
gaatttcattcactgcttaataactcctcaacttga
DBGET
integrated database retrieval system
