Telmatherina bonti: 306764609
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Entry
306764609 CDS
T12083
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tbt Telmatherina bonti
Pathway
tbt03030
DNA replication
tbt03410
Base excision repair
tbt03420
Nucleotide excision repair
tbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
306764609 (rfc5)
03410 Base excision repair
306764609 (rfc5)
03420 Nucleotide excision repair
306764609 (rfc5)
03430 Mismatch repair
306764609 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbt03032
]
306764609 (rfc5)
03036 Chromosome and associated proteins [BR:
tbt03036
]
306764609 (rfc5)
03400 DNA repair and recombination proteins [BR:
tbt03400
]
306764609 (rfc5)
DNA replication proteins [BR:
tbt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
306764609 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
306764609 (rfc5)
Chromosome and associated proteins [BR:
tbt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
306764609 (rfc5)
DNA repair and recombination proteins [BR:
tbt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
306764609 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
306764609 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_11
RCF1-5-like_lid
AAA_22
RuvB_N
DEAD
AAA_lid_RFC1
AAA_14
AAA_24
ResIII
AAA_16
DUF815
AAA_assoc_2
PhoH
AAA_7
nSTAND_NTPase5
AAA_19
AAA_30
AAA_5
ATPase_2
TIP49
AAA_2
Thioredoxin_6
nSTAND3
DNAX_ATPase_lid
DUF4119
Motif
Other DBs
NCBI-GeneID:
306764609
NCBI-ProteinID:
XP_079107916
LinkDB
All DBs
Position
13:complement(<8899114..8904949)
Genome browser
AA seq
335 aa
AA seq
DB search
MASTSKTSLQSKNLPWVEKYRPQTLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGAILSFASTRTIFRKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIEQESIDVTPDGMKAVVTLSSGDMRRSLNILQSTSMAYGKVTENTVYTCTGHPLRSD
IANILDWCLNKDFTAAYKQILELKTLKGLALQDILTEVHLLIHRVDFPPAIRMGLLIKLA
DIEHRLASGTNEKIQLSSMVAAFQAVRNLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacaagtaaaacatctttacagagcaaaaacttaccatgggttgaaaaatac
agaccccaaacacttgatgatttaatttcacacaaagatattctgagtaccattcagagg
ttcatcagtgaagacaagcttccccacctccttttctacggcccacctggaacaggtaaa
acctccacaatcctcgcctgtgctcgacagctgtacaaggacaaagagttcaactccatg
gtgttagagctgaatgcatcagatgaccgaggcattgatgttgtgcgaggtgctattctg
agttttgccagcaccagaaccatcttcaggaagggcttcaagttggtgatactggacgaa
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgatcgagaagttcaca
gaaaacaccagattctgtctcatctgcaactacctctccaagatcatcccagccctgcag
tctcgctgcaccaggttccgctttggcccgctgtctccggatcagatgatccctcggctg
gagcacgttatcgagcaggagagcattgacgtcactccagatggcatgaaggctgtcgtg
accttatcatctggtgatatgagaaggtcactcaacatcctgcagagcaccagcatggcg
tacggaaaggtcacagaaaacactgtgtacacctgcacgggccaccccctccgctcggat
atagccaacatcctcgactggtgcctcaacaaagacttcacagcagcatacaaacaaatc
ctagagctgaagactctaaaaggtttggctctgcaggatatcctcacagaggtgcatctg
ctcattcaccgagtggacttccctccagctattcggatgggtctgctaatcaaattagct
gacatagaacaccggctcgcttcagggaccaacgagaagatccagctgagctccatggtg
gcagcgttccaggcagtgagaaacctagtggtcagcgaggcctcttaa
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