Telmatherina bonti: 306764700
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Entry
306764700 CDS
T12083
Symbol
LOC306764700
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tbt
Telmatherina bonti
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbt03019
]
306764700 (LOC306764700)
03041 Spliceosome [BR:
tbt03041
]
306764700 (LOC306764700)
Messenger RNA biogenesis [BR:
tbt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
306764700 (LOC306764700)
Spliceosome [BR:
tbt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
306764700 (LOC306764700)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
306764700
NCBI-ProteinID:
XP_079108036
LinkDB
All DBs
Position
13:27837547..27847381
Genome browser
AA seq
386 aa
AA seq
DB search
MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKS
TYESNSKHLSFDEVMSQSSPSNCTVYCGGVSSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMSSMQQMSMPQQNKIGFAAAQ
PYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatcaacccagaaccttgtatgtggggaatctgtccagggatgtcaccgag
cctctcattctgcaggttttcacgcagataggaccctgcaaaagctgtaaaatgatagtt
gatacagctggaaatgatccctactgctttgtggagttctatgaacacaggcatgctgct
gcctcattagcagcaatgaatggaaggaaaataatgggtaaggaggtcaaagtgaactgg
gccacaacaccaactagccagaaaaaagacacaagtaatcactttcatgtctttgttgga
gacctcagtccagaaataaccacagaagacgtcaaagctgcattcggtccatttggcagg
atatcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctatggcttt
gtgtctttcttcaacaaatgggatgcagagaatgccattcagcacatggggggtcagtgg
ttgggaggcagacagattcgaactaactgggccacaagaaagccccctgccccaaagagc
acctatgaaagtaactccaagcacctatcctttgatgaagtcatgagtcagtccagcccc
agtaactgcaccgtgtattgtggtggagtcagctcagggcttacagagcaactgatgaga
cagactttctccccatttggacaaatcatggaaatcagagtttttccagacaaaggctat
tcatttgtgaggtttaattcccatgagtcagcagcccatgccattgtgtcagtgaatggc
tcttcgatagagggccacatagtgaaatgctactggggtaaagagaccccggacatgatg
agctctatgcagcagatgtctatgccccagcagaacaagatcggctttgctgctgcccag
ccctatggccagtggggccagtggtatggcaacgggccccaaatcagccagtatgtccca
aatgggtggcaagttcctacctacggtgtttatggccaggcctggaaccagcagggcttc
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggattgaatgggagtatgctagccaaccagcccggtatgggagcc
gcaggataccccacacactga
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