Telmatherina bonti: 306765419
Help
Entry
306765419 CDS
T12083
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
tbt
Telmatherina bonti
Pathway
tbt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306765419 (ddx42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbt03041
]
306765419 (ddx42)
Enzymes [BR:
tbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
306765419 (ddx42)
Spliceosome [BR:
tbt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
306765419 (ddx42)
Complex B
306765419 (ddx42)
Complex C
U2 SnRNP specific factors
306765419 (ddx42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
306765419
NCBI-ProteinID:
XP_079109000
LinkDB
All DBs
Position
14:30399090..30406339
Genome browser
AA seq
944 aa
AA seq
DB search
MNWNKGGPGVKRGFGFGGFSLAGKKEEPHPPQKSHTSFGAPGSSSGYGKGQQLPSFYKIG
TKRANFDEENAYFEDDEEESGSNNDLPYIPAENSPTRQQMQSGGGSDSEDDPLDAFMAEV
ENQAAKDMKKLEEKEKEKKSAKGIRDDIEEEDEQEAYFRYMAENPTAGLTQEEEEENIDY
DSDGNPIPSATKKIIMPLPPIDHSEIDYSPFEKNFYNEHEELSSLTGTQVLELRQKLNLR
VSGAAPPKPCTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSG
KTAAFIWPMLVHIMDQKELEAGEGPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYG
GGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVR
SIASHVRPDRQTLLFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQIVELLPSGT
DKWGWLTRRLVEFTSTGSVLIFVTKKANCEELANNLMQEGYSLGLLHGDMDQSERNKVIS
DFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGLAFTLL
TNKDTTFAGDLVRNLEGANQAVSKELMDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYKE
RPGLGAESSERSISSSLLSSSSSYEGYTKPATGAMGDRMSALKQAFQAQYKSHFVAATSG
PPKLSTKSSSSSGWTSAGSLNSVPTEAANGSERSHMASFSMPGFTSAGSLSSVPASQSSS
QHSTPPPAPPSQRESSRDRHGEDRGRHEDNHHRHSDRSDRHSGEDRYGDRDRHGDRDRDR
HGDRDRHSSRSSDSRNGDGSRRDREDRRSDRDGGDRGSGDGRDREDRRSNRDGGDRGSGD
GRDREDRRSDRDGEDRGSGDGRDRGDDNFAVPNPPKRRKSRWNN
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaaaggtggtcctggtgtgaagcgaggctttggttttggaggtttttcc
ctagcagggaagaaagaggagcctcatcctcctcagaaatctcacacatcatttggagct
ccaggttcaagtagcggatatggaaagggccaacagctgccatcattctataaaataggg
acaaaaagagccaattttgatgaagaaaatgcgtattttgaggatgatgaagaggagtct
ggcagcaacaatgatcttccatacattccagcggagaactcccccacacggcagcagatg
cagtcgggtggtggctcagatagtgaagatgacccactggatgctttcatggcagaagtt
gagaatcaagcagctaaagacatgaagaaactagaagagaaggaaaaagagaaaaaatca
gccaagggtattcgtgatgacattgaagaggaggatgaacaagaagcctatttccgctac
atggccgaaaaccctacagccggactaacccaagaggaagaggaggagaacattgactat
gacagtgatggcaaccctattccgtctgccaccaagaaaatcatcatgccgcttcctcct
attgaccattcagagattgattactcgccctttgagaaaaacttttacaatgagcatgag
gagcttagcagcctcactggaactcaagtgctggagctgaggcagaaactgaatttacga
gtgtctggtgctgcccctccaaaaccttgtaccagttttgcacactttggttttgatgag
cagctgatgcatcaaattcgaaagtctgagtatactcagcccacaccaattcagtgccag
ggtgtaccgattgctttgtctggacgtgacatgattggcattgcaaaaactggcagtggc
aaaactgcagcttttatttggccaatgctggttcatatcatggatcaaaaggaactggaa
gctggggaaggacccattgcagttattgtgtgtcccaccagagagctttgtcagcagatc
catgcagaatgtaagcgttttggtaaagcctactcactgcgttctgtggctgtttatgga
ggaggtagcatgtgggagcaggccaaagctctgcaagagggagcggagattgtggtgtgc
actccaggtcgtctcattgaccatgtgaaaaagaaggccacatcgctgcagagagtgaca
taccttgtgtttgatgaggccgatcgcatgtttgacatgggatttgaatatcaggtcaga
tcaattgcaagtcacgttcgccctgacaggcagactcttttgttcagcgccactttccga
aagaagattgagaggttggcaagagacattctggttgatcctattcgtgtggttcaggga
gacattggagaggccaatgaagacgtgactcagatcgtggagcttctacccagtgggaca
gataaatggggctggctgacccggcggctggttgagttcacctccaccggttcagtcctc
atttttgtcaccaagaaggctaactgtgaagagctggcaaataatttgatgcaagagggc
tacagcctgggcctcctgcatggagacatggaccagagtgagaggaacaaagtcatcagt
gacttcaaaaagaagaacttgccagttctcgtggccactgatgtagctgcccgcggtctc
gacatcccatctatccgtacagtagtaaactacgatgtggctcgggacatcgacacgcac
actcacaggattggtcgaactggtcgtgctggagagaaaggtttagccttcactcttctc
accaacaaagacaccacatttgctggagacctggtgcgaaatttggagggagctaatcaa
gctgtttccaaagaacttatggatttagccatgcagaatccctggtttaggaaatcaaga
ttcaaaggtggtaaagggaaaaagctgaacattggtggaggtggtctcggatacaaagaa
aggcccggcctgggagctgaaagctcagaacgtagcatcagcagcagcttgttgtcctcc
tctagtagctatgaaggctatacaaagccagcgactggggcgatgggggatcgcatgtct
gcactgaaacaagccttccaggctcagtataaaagccactttgtggctgctaccagtggc
cctccaaagctcagcaccaagtctagcagttcatctggctggactagtgctggcagcctg
aactctgttccaacagaggctgccaatggctcagaacggtctcacatggcaagcttttca
atgcccggtttcaccagtgcgggctccctaagctcggtgccagccagtcagagcagttca
cagcacagcacccccccacctgctcctccttcacagcgagagagctcacgggacagacac
ggggaggacaggggacgccatgaagacaatcaccatcgtcacagtgataggagtgaccgg
cacagtggtgaggaccgctatggagaccgagatcgccacggagacagggatcgtgaccgc
cacggggaccgggatcgccatagtagccgtagcagtgacagtcgtaacggtgatggaagc
aggagggacagagaagacaggaggagtgatagggatgggggtgacagggggagtggagat
gggagggacagagaagacaggaggagtaatagggatgggggagacagggggagtggagat
gggagggacagagaagacaggaggagtgatcgggatggggaagacagggggagtggagat
gggagggacagaggagatgataactttgctgtccccaacccaccaaaacgcagaaagagc
agatggaacaactaa
DBGET
integrated database retrieval system
