Telmatherina bonti: 306766074
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Entry
306766074 CDS
T12083
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tbt Telmatherina bonti
Brite
KEGG Orthology (KO) [BR:
tbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbt03000
]
306766074 (sox1a)
Transcription factors [BR:
tbt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
306766074 (sox1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
306766074
NCBI-ProteinID:
XP_079109806
LinkDB
All DBs
Position
15:complement(<15396430..>15397464)
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AA seq
344 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTTAGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLTVGMSSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSVSPPVSSTHSRGPCPGDLR
EMISMYLPTGEPGDPSMQSRLHALPQHYQSATAGVNGTVPLTHI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgaccttcattcccccggcccccaaacgaacacgact
gcggggcaaacggggccgaatagcgggtccaaagcgaatcaggaacgagtgaagagaccg
atgaacgcgtttatggtgtggtcccgtgggcagcggagaaagatggcacaggagaacccc
aaaatgcacaactcagagatcagcaagaggctgggcgccgagtggaaagtgatgtcagag
gctgaaaagcgtcctttcatcgacgaggcgaaacggttgcgagccatgcacatgaaggag
catccggattacaagtaccggccaagacggaagaccaagacattgttgaaaaaggacaaa
tattcccttgctggtggactgctttctgggcccagcggtggcggtggagttggtttaaca
gtcggcatgagttcatcaggggtcggacagaggttagaaagcccagggggtcacggaggg
tccgcaagctccggctacgcgcacatgaacggctgggcgaacggtgcgtactcagggcag
gtggctgcagccgcggcggctgctgcgatgatgcaggaggctcagctcgcctacagccag
catcctgggagcggagcccaccaccaccatcactcacaccaccaccattcgcacaacccc
cagcccatgcaccgctatgacatgacagccctgcaatacagccccatctcgaactctcag
agctacatgaacgcttctccatccggctacggcggtatcacctacacacagcaccagggc
tccggcgtctcctcctcagctgccatggggacgttaggatcgctggtgaagtcggagccg
agcgtaagccctcccgtcagcagcacacactcacggggtccttgcccaggagacttgaga
gagatgataagcatgtatttaccgaccggagagcccggggacccgtcaatgcagagtaga
ctccatgccttgccgcaacattaccagagcgccacggctggggtgaacgggacggtccct
ctaacacacatttag
DBGET
integrated database retrieval system
