Taurulus bubalis (long-spined sea-scorpion): 306735783
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Entry
306735783 CDS
T11969
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
tbu Taurulus bubalis (long-spined sea-scorpion)
Pathway
tbu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306735783 (dhx38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbu03041
]
306735783 (dhx38)
Enzymes [BR:
tbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
306735783 (dhx38)
Spliceosome [BR:
tbu03041
]
Complex C
Other components
Step II factors
306735783 (dhx38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
nSTAND_NTPase5
Sigma54_activ_2
AAA_16
Toxin_trans_Wo
Flavi_DEAD
PhoH
Motif
Other DBs
NCBI-GeneID:
306735783
NCBI-ProteinID:
XP_079073465
LinkDB
All DBs
Position
4:14431355..14450311
Genome browser
AA seq
1247 aa
AA seq
DB search
MDDDESMHRLEGTDPAAQVGGLMVKKLSAAEEPHVFRAPTPRTSLLGLDLLAAQKRKERE
TKEQAEADDSNRKKSKVSSYKDWEEGKSDSGSDEEDDDKDGDAQKESRKYRVTGSETPSS
PGGVSEEFKRRHQQREKDRREHGVYASSKEDKDKERSRDKGRDRRNERDERESSRGGSSS
RSERGERSDRSPRDGFSDRISRGTKREEPLSPQQRPRDSFTPSRSNWEEDDSGYSSSRHS
QWESPSPALPHREMDRSERSQRSGRESERRDRSVRGRYPDDTPLPTPSYKYNEWANDRKH
LGSTPRLSQGKGRKEDGQGGFMFDNEDEKDQWEEDQKQADRDWYMMDEGYDEFHNPFTTT
SEEYVKKREQILQKQTQKRISAHKRQINEDNERWETNRMLTSGVVQRLEVDEDFEEDNAA
KVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDMAIIARKGSQLVRKHREQKERKKA
QHKHWELAGTKLGDIMGIKKTEAEDSSGGKPVGEDGKVDYRAEQKFADHVKEKTEASSDF
AKKKSLLQQRQYLPIFAVRQQLLNIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTSYGM
VGCTQPRRVAAMSVAKRVSEEIGTNLGEEVGYAIRFEDCTSEKTLIKYMTDGILLRESLR
ESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRTDLKLIVTSATMDSDKFAAFFGNV
PIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGLIGDILIFMPGQEDIEVTSDQ
IVERLEDLDNAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMF
VVDAGYCKLKVFNPRIGMDALQVYPISQANANQRSGRAGRTGPGQCYRLYTQSAYKNEML
TTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGAL
TPTGRLMVEFPLDPALSKMLIVSCDMACSADILIIVSMLSVPAIFYRPKGREEESDQVRE
KFAVPESDHLTYLNVYMQWKNNNYSSIWCNDHFIHTKAMRKVREVRSQLKDIMVQQRMNL
ISCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSSLFGMGYTPDYIIY
HELVMTTKEYMQCVTSVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEELTNMEEEMSMA
EEQLRSRREEQDKKSTTGIVKAPKICTPGRKEEAPMTPRRTPARFGL
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatgagtccatgcataggctggaagggactgatccagctgctcaggttggt
ggactgatggtaaagaagttgagtgctgctgaagagccccatgtttttcgagcacccact
cctcgcacctcgctgctgggcttggatctgctggcagcccagaaaaggaaggagcgtgag
actaaggagcaggccgaggcagatgacagcaatagaaagaagtcaaaggtttcctcctac
aaggactgggaggaaggtaaaagtgactctgggtctgatgaagaagacgatgataaggac
ggggatgctcagaaggagagcaggaagtatcgtgtgactggctcagagacaccctcaagc
cccggaggggtcagcgaagagttcaaacgccgacaccagcagagagagaaagacagacgt
gagcatggagtctacgcctcctctaaagaggacaaggacaaagaaaggagcagagataag
ggaagagatcgaaggaatgaaagagacgagcgagagagcagtcgtggcggcagcagcagc
cggtcggagcgtggtgagaggagcgatcgctcaccaagagatggcttctccgatcgcatc
agcagggggactaagagagaagaacccttgtcgccacagcaacgtcccagagattctttc
acaccctcgcgctccaactgggaggaagatgacagtggttattccagttcacggcattcc
cagtgggaatctccgtcccctgccctgcctcacagagagatggatcgctccgagcgaagc
cagcgctccggccgagagagtgagaggagagacaggtcagtcagaggccgttaccctgac
gacacacccctgccgaccccatcatacaagtacaacgagtgggccaatgacagaaagcat
ttgggttctacacctcgtttatcacaaggaaaaggtaggaaagaagatggccagggagga
tttatgtttgataatgaggacgagaaagaccagtgggaggaggaccagaagcaagctgac
agagattggtacatgatggatgaaggctatgatgagttccacaaccccttcactaccacc
tctgaagaatatgtgaagaagagagagcagatccttcagaagcagactcaaaaaaggata
tctgcccataagcgacagataaatgaggataatgagcggtgggagaccaaccgtatgctg
accagtggtgtagtgcagaggttggaggtggatgaagactttgaggaggacaatgctgct
aaggttcatctgctggttcacaacctggttccaccctttctggatggaagaatagtcttt
actaagcagccagagcctgtcatccctgtgaaagatgcgacctctgacatggccatcatt
gctcgtaaaggcagccagcttgtccgtaaacatcgtgagcagaaagaacgtaagaaggcc
cagcacaaacattgggaattggcaggcaccaagttgggagatatcatgggcatcaagaag
actgaagcggaagactcctctgggggcaaaccggtgggagaggatggcaaagtagactac
agagcggagcagaaatttgcagaccacgtgaaagaaaagactgaggccagcagtgacttt
gctaagaagaagagccttctgcaacagagacagtacctgcctatttttgctgtcagacag
caacttctcaacatcatacgggacaacagcattgtgattgttgttggggagacgggcagt
gggaagaccacacagctgactcagtacctgcatgaggacggctacaccagctatggcatg
gtgggttgtactcagccccgaagagtggcagccatgagtgtggccaagagagtcagcgag
gagatcggcactaaccttggagaggaggtgggctacgcaatccgttttgaggactgcaca
tccgagaaaaccttaataaagtacatgacagatggtatcctgctcagggagtcattgagg
gagtccgacctggatcactacagtgctgttatcatggatgaggctcatgaacgctccctg
aatactgacgtgctgttcggcctgctacgtgaggttgtagctcgacgtactgatttgaaa
ctcatagttacctctgcaactatggactccgacaagtttgctgcattttttggcaacgtg
cccattttccacattccaggaagaacatttcccgtagacatcttatttagcaagactcct
caggaggactatgtggaggcagcagtgaagcaggccctgcagatccacctcagtggactg
ataggcgacatcctcatcttcatgcctgggcaggaggatattgaggtgacgtcggatcag
atcgtggagcggctggaggacttggacaatgctcctgctctggccgtgctgccaatctac
tcccagctgccttctgacctccaggccaagatcttccagaaggctccagatggtgtgagg
aaatgcattgtcgccacaaacatcgctgagacctccctcactgtggatggaatcatgttt
gttgtggatgcaggatactgcaaacttaaggttttcaatcctcgcattggaatggatgct
ctacaggtttatcccatcagccaggctaatgccaaccaacgttctggcagagccggacgt
acaggacctggacagtgttacaggctctacactcagagtgcctataagaatgagatgttg
actaccaccataccagagatccagaggaccaacctggccaacgtggtcctgctgttgaag
tctctgggtgttcaggatttgctcctcttccacttcatggatccaccgcctgaagacaac
atgctcaactccatgtaccagctgtggatcttgggagccctagacaacacaggtgctttg
acaccaacggggcgcctgatggtggagtttcccctcgaccccgccctctccaagatgctg
attgtgtcctgcgacatggcctgcagtgctgacatcctcatcatcgtctccatgctgtct
gtgccagccatcttctacagacctaagggccgtgaggaggagagtgaccaggtgagggag
aagtttgcagtcccagagagcgaccaccttacctacctgaacgtctacatgcagtggaag
aacaacaattactccagcatctggtgcaacgatcacttcatccacaccaaggccatgcgc
aaggtgcgtgaggtgcgctcccagttaaaggacatcatggtgcagcagaggatgaacctg
atttcctgcgggtcagactgggacgtcatcagaaagtgcatctgcgctgcatacttccac
caggctgccaagctcaagggcattggtgaatatgtgaacgtgaggacaggcatgccatgt
cacctccatcctaccagctccctgttcggtatgggctacacccccgactacatcatctac
cacgagctcgtcatgaccaccaaggagtacatgcagtgtgtgacctcagtggatggcgag
tggctcgcagaacttggaccaatgttttacagcatcaaacatgcaggaaaaagcagacag
gagaaccgtcgccgggccaaggaggagctcaccaacatggaggaggagatgtccatggct
gaggagcagctgcgatcacgtcgagaagagcaggataagaagagtaccactggcattgtt
aaggctccgaaaatctgcacaccaggaagaaaagaagaggcccccatgacgcccagacgc
acccctgcccgctttggactttag
DBGET
integrated database retrieval system
