Taurulus bubalis (long-spined sea-scorpion): 306739596
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Entry
306739596 CDS
T11969
Symbol
LOC306739596
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
tbu Taurulus bubalis (long-spined sea-scorpion)
Pathway
tbu03013
Nucleocytoplasmic transport
tbu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tbu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
306739596 (LOC306739596)
03015 mRNA surveillance pathway
306739596 (LOC306739596)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbu03019
]
306739596 (LOC306739596)
Enzymes [BR:
tbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
306739596 (LOC306739596)
5.6.2.5 RNA 5'-3' helicase
306739596 (LOC306739596)
Messenger RNA biogenesis [BR:
tbu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
306739596 (LOC306739596)
mRNA cycle factors
Common to processing body (P body) and stress granule
306739596 (LOC306739596)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
NPHP3_N
ATPase
nSTAND3
NAT10_TcmA_helicase
DEAD
SRP54
UvrD-helicase
AAA_16
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
306739596
NCBI-ProteinID:
XP_079077752
LinkDB
All DBs
Position
1:<30751982..>30764290
Genome browser
AA seq
1111 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQTQSQLDSQVNGPD
GILQNGDEPVIKASQLLAELNFEEDEEDTYYTKDLPRHACSYCGIHDPACVVYCNTSKKW
FCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCACRNVFLLGFIPAKADS
VVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQIN
KLEELWKENPTATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKES
QTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPPWKSIGHVIKV
PDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYH
KLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSA
TIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHN
QTRNMDSMPELLKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGDP
RLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQS
LFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPD
KPMFFYVTQGQEEIASSGTSYLNRTEASNVEKITTRLLKAGAKPNQIGIITPYEGQRSYL
VQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVAL
TRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTI
NPGGRFMSTAMYDAREVLIPGSVYDRSSNGRSSNMYFQTHDQIGMIGTGPSSMTSLNIPI
PFNLVMPPIPPPGYMGQINGPSAGRGGGMKGKAGSGGGGGTRGGRQRNRGNMGNHSGGNG
GSDRHGGHMSGSQASQDLGSQPFSQGPLTQGYINMSQPSQMSQPGLSQPELSQDSYLGDE
FKSQIDVALSQDSTYQGERAYQHGVTGLSQY
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaggcgtacgggccgagctcgcagactctcacgttcctcgacaccgaggaa
gccgagctgctgggagcggacacccagggctccgagtacgacttcaccgacttcaccctg
ccgagccagacccagacccagacccagagccagctagacagccaggtgaatggccctgac
ggcatactacagaatggggacgagcctgtcatcaaagccagtcagctgctagcagagctg
aactttgaggaggatgaggaggacacctactacaccaaggatctgcctcgccatgcctgc
agttactgtggaattcatgatccagcctgtgtggtctactgcaacaccagcaagaaatgg
ttttgtaatggccgtggaaacacatccggcagccacattgtaaaccacctggtgagagca
aagtcaaaggaggtgaccttgcataaagatggccctctgggggaaacggtcctggagtgc
tacaactgtgcctgtcgcaatgtcttccttctgggcttcatccctgctaaagccgactca
gtagtggtgctactgtgcaggcagccatgtgccagccagagcagcctgaaggacatcaac
tgggacagctcacagtggcagcctctcatccaggaccgctgcttcctgtcctggctggtg
aaaatcccttcagagcaggagcagctcagggctcgtcagatcaccgcccagcagatcaac
aagctggaagaactctggaaggaaaatcccactgcgaccttggaggacctggagaagccg
ggtgtggatgaggagccccaacatgtgctgctccgctatgaggatgcctaccagtaccag
aacatctttggtcctcttgtgaagctggaggctgactacgataaaaaacttaaagagtct
cagactcaagacaacatcactgtcagatgggacttgggcctgaataaaaagaggatagct
tatttcactcttcccaagacagactcagacatgcggctgatgcagggagatgaaatttgc
ctgaggtacaaaggagacctggcccccccatggaaaagcattggacatgtcatcaaagtc
cctgataactatggtgatgagattgccatagagctaaggagtagtgctggggctccagta
gagatcccacacaactttcaggtcgactttgtgtggaagtccacttcctttgacaggatg
cagagtgccctaaagacgtttgcggtggatgaaacttcagtgtctggttacatctaccac
aagctgctgggacatgaggtagaggatgtggtcataaagtgtcagctgcccaaacgcttc
accgctcaaggcctgcccgaccttaaccactcacaggtgtacgctgtgaagacggtgctg
cagcggcctctcagtctgatccagggtcctcccggcacagggaagacggtaacctctgcg
accatcgtctaccacctggccagacagggcaacgggccagtgctggtgtgcgctcccagt
aacattgccgtcgaccagctgacagagaagatccatcagacaggcctcaaggttgtgagg
ctgtgtgccaagagcagggaggctatcgactcgcctgtgtccttcctggcgctgcacaac
cagacccgtaacatggacagtatgccagaacttctgaagctccaacagctgaaggacgag
actggagagctgtcctcctcagacgagaagcgctacagagctctgagacgcactgctgag
agggagctgcttatgaatgccgatgtgatctgctgtacctgtgtcggggcaggggatcct
cgtctggccaagatgcagttccgctcaatcctgattgatgagagcacccaggccactgaa
cccgagtgcatggtgcccgtcgtcctgggggctaaacagttgattctggtgggtgatcac
tgccaactgggccctgtggtgatgtgtaagaaggcagccaaagcaggtctgtcccagtct
ctatttgagcgtctagttgttttggggattcgaccaatccgtctgcaggtccagtaccgc
atgcatccagccctcagcgccttcccctccaacatcttctatgagggctctctgcaaaat
ggagtcactgccgcggaccgtgtgaagaaaggctttgacttccagtggccgcagcctgac
aagcctatgttcttttatgtcacccaaggccaagaggaaatagccagctctggaacatcc
tatctcaacagaactgaggcatccaatgtggagaaaataaccacaaggttgctgaaagct
ggagcaaaacccaatcagattggcatcattacaccctacgagggacagaggtcctacctg
gtccagtacatgcagttcagtggctccctccacaccaaactctaccaggaggtggaaata
gccagcgtggatgccttccaaggcagagagaaggacttcatcatcctgtcctgtgtaagg
gccaatgagcaccagggcatcggcttcctcaatgatcccagacgtctcaatgtggcactc
accagggccaggtatggtgtgattattgtgggaaaccccaaggccctgtccaagcagcct
ctgtggaaccacctgttgaactactacaaggagcagaaggtcctggttgaagggcccctt
aacaatctgagggagagcctcatgcaattcagcaaaccccgcaagcttgtcaacaccatc
aaccctgggggtcgatttatgagcacagccatgtatgatgccagggaagtcctcattcct
ggatctgtttatgaccgtagcagtaacggacgttcgtccaatatgtatttccagacccac
gaccagattggtatgatcggcacaggtcccagttctatgacttccctgaacatccccatc
cccttcaaccttgtgatgccccccatacctccacctgggtacatgggacagatcaatgga
ccctcagcaggtcgtggtggaggaatgaaaggcaaggcaggcagtggaggaggaggcggg
actcgaggtggccgtcaaagaaaccgcggcaatatgggaaaccacagtggaggaaatgga
ggatcagaccggcacggaggccacatgagtggcagccaggccagccaggatctgggctcc
cagcccttctcccaggggcctctgacgcagggctacatcaacatgagccagccgtctcag
atgagccagcctggactctcccagcctgaactctcacaggacagttacctaggagacgag
ttcaagtcccagattgatgtggctttgtcccaggactccacctaccagggggagcgggcc
taccaacacggtgtgactggactgtcccagtactag
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integrated database retrieval system
