Taurulus bubalis (long-spined sea-scorpion): 306740056
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Entry
306740056 CDS
T11969
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tbu Taurulus bubalis (long-spined sea-scorpion)
Pathway
tbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
306740056 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbu03019
]
306740056 (skic3)
Messenger RNA biogenesis [BR:
tbu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
306740056 (skic3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_19
TPR_14
TPR_11
TPR_8
TPR_17
TPR_9
TPR_12
CFAP70_TPR_C
TPR_CcmH_CycH
CFAP70_mid_TPR
ANAPC3
CABIN1_N
TTC22_N
ARM_TT21_C
Fis1_TPR_C
TPR_BSK1_C
TPR_Psidin_N
SRX
Motif
Other DBs
NCBI-GeneID:
306740056
NCBI-ProteinID:
XP_079078289
LinkDB
All DBs
Position
8:complement(13507174..13522324)
Genome browser
AA seq
1567 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEYKDALKHCKAVLKLEKDNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQQLAWQGLANLYEKTDQWDFKVELPNIYQRLVDLYASSDKNKCFEIIS
KLSDIYQSDKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWQQMTQLLSDCLNDEERDTAT
QQHLITAFEKSMVLMDPVPGEQHKKVSADYVKCLSKLPKEEPKMIAACESMLSLYPNQSY
PLETLCSHYLKTGVQNEDAVSCFSRLLDLAPNSGLGHLGLGTKALQEGRFKDAIKDLAQG
LKRMSSSTGWCSLAEAQFKMQRYSDCAMSCSQGLTVCVSGDKELRLKLLKLQLEALVRSG
GDTAAEQALDIFSQIPDAEKDPVLGALKGRAYLNKGQVDEALKVSSELVASNPNLAHGFV
LRGLAQMAQGKQQLAEESFLKATSQSPDCGEYYFLLGRLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLGCVFRYLGHYYRQVANDHSRSRGCYKKAFEMDNDDAESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKIGEHQQAVADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITVQQDY
VPALKGLGECQLSLAKGLMEDCRDRGAIDLIQQAIQNLFRAVEIRPDMSCLWKLLGDACT
AVVSVAPNSAQVLVPAPLAGFDPNTQSHTLNQAQTLKVGERCYARALKLMSEVPSLWNDL
GLNYYRQSSLSSVTQDDQNSPSLLMEKAQQCLKKAIMMDSENYSYWNALGVISMSKGLED
FALAQHCFIKSIQVEPNNVVAWTNLGTLYFKNGNIELAHKAFKIAQSLEPLYVNCWIGQA
LIAEKVGSYDAMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALKAYKRAVELLKSMSLTEELAFA
LGSYGRALCTLGQSEEAVRVYNSTPLQELSDLAGLALAYCRAGLIPESINAYELALAVAS
TEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPIAESLLCLCALGLVHGDATLAA
AALTELLKQGSASVNVIEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPKKANGGAMAGHIACLSSMTQGKRALLYSGVNQLASGRHSGEDGHRNALKTMQR
AVLLCPDDPATWAGLMAACHTENTSCYLSGSAPSRRGLEQTLMSVVSEKVHNVEEIERPL
AQALEGWVLKQAVTGLMLWGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLLAGGG
TVLPDSVLEQLHNTVMLNPKNLGAWHWLAEVFRSQGLLVQAVMAYRQSLQLASQLGLHSS
QVASLLRLALLALGNFMAGVPGNEWADMILEATTEVLKLGSSPMALLFQALLHYVTKMGA
RETRRLLERLAYAQDFPVTVVQVSSWYLLRHLHAKNDQDLMNVLLQNAKMKGDKRLLEFH
SLLASST
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagcggcactgaaaagtgccagagaggccattaaaaacaaa
gagtacaaagacgctctaaaacactgcaaggctgttttgaaacttgagaaggacaattat
aatgcatgggtattcatcggcttggcagccagtgaactggagcaaccagaccaggcacag
acagcctataaaaaagctgtggagctggagcctgagcagcagctggcatggcagggtttg
gcaaatctttatgagaagactgatcagtgggattttaaagttgagctacccaacatctac
cagaggcttgttgacctgtacgcaagctcagacaaaaataaatgttttgagatcatcagt
aagctgtcggatatctatcagtctgacaaagaatatttaaagttggcaaaggtttggctg
caactcattcaggtgaaggaggaagaggctgtggacaaaaaagagttactgcagctatgg
caacagatgacccaactcctctcagattgccttaatgatgaagagcgggacactgcaact
caacagcatttaatcacagcatttgagaagtccatggttctcatggatcctgtaccagga
gagcaacacaagaaggtctcagctgattatgtcaaatgtctttctaaactgcctaaagaa
gaacccaaaatgatagcggcatgtgagtccatgctgtccctctaccccaaccaaagttat
cctctggaaaccctttgttctcactacctcaaaacaggtgttcagaatgaggatgcagtc
agctgtttctcccgactcctcgatctggcccctaacagcggattaggtcacttgggtctg
ggcaccaaagcactgcaagaagggaggtttaaagatgccattaaggaccttgcacaaggg
ttgaagagaatgagctccagtaccggatggtgcagtctggctgaagctcagtttaaaatg
cagagatactcagactgtgctatgtcatgctcccaaggtctgacagtatgtgtgtccgga
gacaaggagctgaggctcaaactgctgaagctgcagctagaggctttagtcaggagtggg
ggagacacggctgcagaacaggctttggatatattctcacagatcccagatgctgaaaaa
gacccagttttaggagctcttaaaggacgagcataccttaacaagggacaagttgatgaa
gcactcaaggtgtcatcagagctggtagcctctaaccctaatctggcccatgggtttgta
ctgagaggactggcacaaatggctcagggcaagcagcagctggcagaggagagtttcctg
aaggcgactagccagagcccagactgtggagagtattatttcttgctgggacgactctac
tgggacatgggagaagagacccgaaaagacagaagcaaagcccatacacatttgctcaag
gctgcaaagttagacccacaccttggttgtgtattccgctaccttggacattactaccgc
caggtggcaaacgatcacagccgctcacgaggatgctataagaaggcctttgagatggac
aatgatgatgctgagtctggagctgcctcagtggatctcagtatggagcaggacgacatg
gacactgctttagcaatacttcagtcagtgattgagaaagccacaccaggctctgctaaa
tgggcttggatgaggcgggggctgtactacctaaagatcggagagcatcaacaagctgta
gctgatctgcaggcagctctgagagcagatccagaggactgggtgtgttgggagtgttta
ggtgaggcctacttaaaccgccggagtttcacagccgccctgaaggcctttggtaaggcc
catcagcttcaaccctcctccatttacagtgtctaccaggctgctgctatcaaacagacc
ctgggcaagttcaaagaggctgttgcagagtacttgcagatcacagtgcagcaggattat
gtgcctgcccttaaaggtcttggggagtgccagctgtctttggcaaaaggtttaatggaa
gactgcagagatagaggagccattgaccttattcagcaagccatacagaacctcttccga
gctgtagagatacgtccagacatgtcctgtttgtggaagctgctgggagatgcttgcacc
gcagtcgtttctgtggcaccaaacagtgctcaagttttagttccagccccactagctggt
tttgacccaaacacccagagccacacactgaaccaggcccagacactcaaagttggtgag
aggtgttatgctcgcgctttgaagctgatgtctgaggttcccagcctttggaatgaccta
ggactcaactattatcgtcagtccagtctatccagcgtcacacaggacgaccagaactct
ccatcgctgctcatggagaaggctcagcagtgtttaaaaaaagctatcatgatggacagt
gaaaactatagctactggaatgccctgggtgtgatttccatgagcaaaggtcttgaggac
tttgctctggctcaacattgcttcatcaagtccatacaggttgaaccaaataatgttgtt
gcttggaccaaccttggtaccctgtattttaagaacggcaatattgagcttgcacacaag
gccttcaagattgcacagtcgctggagccgctctatgtcaactgctggattggacaggcg
ctgatagcagagaaagtgggaagctatgacgccatggatcttttcaggcacaccactgaa
ctcagcacacatatggagggagtgaaaggttatgcctactgggtatgttccaccctgctg
gataagagcaacagagactctgaactgtaccgctacaacatagtccagatgaatgccatc
tctgctgctcaggtggctctcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcattatgcttggttacctaaatgagcatctgcagctgaagaggcaggccttaaaggct
tacaaaagagctgttgaactgcttaagtccatgtccttgaccgaagagctggcctttgct
ctgggcagctatggacgtgctttgtgcaccctcggtcagtcagaggaggcagtgcgtgtc
tataattccactccactgcaggagctcagtgatctggctggactggcacttgcctactgc
agggcaggactcatcccagagagcattaacgcctatgaacttgccttggctgtggcttcc
actgagaaggagaaggcttacatcttgacggctctggctctgcttcagcaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcaatgttaaaggagccaatcgca
gagtccctgctgtgtttatgtgccctggggttggtccacggtgacgctacactagctgct
gctgccctgactgagttgctaaagcaaggttcagcctctgtgaatgttatagagcagaga
tgtctcctcacctgcaccttgctcgccctgcagggcaactacagcgcagtgcaaagagag
gcttctagagctgtacacagcaatcctggaaacccatctctatgggccctgctgtccagg
ctggtaccacaatactaccccaagaaggctaatggcggcgcgatggctggtcatattgcc
tgtctctccagtatgacccaaggaaagagggcgttgttgtacagtggagtgaaccagctg
gctagtgggagacactctggagaggacggtcacagaaatgcactgaagactatgcagaga
gctgtgctgctctgtccagatgatccagcaacatgggcaggattaatggccgcctgtcac
acagaaaatacttcctgttatctttcaggttctgctcctagcagacgaggactggagcaa
acactcatgtcagtggtttctgagaaagtgcataacgtggaggagatagagcgcccccta
gcccaggctctagaaggctgggtactaaaacaggcagtgactggtctcatgttgtgggga
cagctggagcaggctgaagccctctgctcacaggtgctgaatgtttctccagaacacccg
gcagtgatgctgtcactgagacaggtgcagtgtcagcgcctcttactggccgggggtggt
actgtgctcccagactctgtgctggagcaactccacaacaccgtgatgctgaaccccaaa
aaccttggggcgtggcattggctggctgaggtgtttcgtagccagggcctgctggttcag
gcagtcatggcttacaggcagagtctgcagctagcctcacagctcggcctgcacagcagc
caggttgccagcctgcttcgactagcgctgctagctctaggaaactttatggcgggtgtt
ccaggaaatgaatgggcggacatgatactagaagccaccactgaagtcttgaagctgggt
tcatctcctatggccctcctcttccaggccctgctccactatgtgaccaagatgggtgcc
agggaaacaagacgtttgttggagaggctggcttacgctcaagacttcccagtgacagtg
gtgcaagtgtccagctggtacctcctcagacacctgcatgcgaaaaacgaccaggatcta
atgaatgtccttttgcagaatgccaaaatgaagggagataaaagactgctggagtttcat
tcactccttgcctcttcaacctga
DBGET
integrated database retrieval system
