Taurulus bubalis (long-spined sea-scorpion): 306748317
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Entry
306748317 CDS
T11969
Symbol
skic2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
tbu Taurulus bubalis (long-spined sea-scorpion)
Pathway
tbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
306748317 (skic2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbu03019
]
306748317 (skic2)
Enzymes [BR:
tbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
306748317 (skic2)
Messenger RNA biogenesis [BR:
tbu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
306748317 (skic2)
mRNA degradation factors
3'-5' decay
Ski complex
306748317 (skic2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
Helicase_C
DEXQc_Suv3
ResIII
MTR4-like_stalk
DUF3516
HTH_23
Motif
Other DBs
NCBI-GeneID:
306748317
NCBI-ProteinID:
XP_079087598
LinkDB
All DBs
Position
16:<7236915..7252069
Genome browser
AA seq
1245 aa
AA seq
DB search
MERINVPPAGPADLPLSLLEMGCSGRFELITHPSLDQPFAPQSTLPHGLPPTSLSLEREV
EKQFLQDAAWLPIHDTDFAFQKFLKVTRREVSVDSLINCTPSALHSGVSVVRDPTTGMLL
DFTEVLLENTGLSAKNSLSLHRQPGPPSESLRGSNTNYPFRPGGMEELTLDQIKKKSDLE
ADIDFENDLLRVPPGLKAGMDFTDKDAKIAKAEVTLMSLLSTLDDITDLEPVAEEKEEGK
ESEEAPNLPRTNSLEDLGVKDVVSSSTPSERGKDEKLKPKENPEENKKWAIPVNINAPCD
DFYKRIPNPAFKWPFELDVFQKQAVLKLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMT
RTIYTSPIKALSNQKFRDFKSTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVI
RDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNAVEFSEWIGRIKKKH
IYVISTMKRPVPLEHYLYTGNSTKTQKEMFLLLDATGNFLTKGYYAAVDAKKERTSKHAQ
SFGTKNTSHSTTASQDRSVWLTLLHFLSKRQQTPVVAFTFSRTRCDDNARSLDSMDMTTS
IEKAEIHSFFQKSLSRLRGADRQLPQILVMRDLLKRGIAVHHSGILPILKEVIEMLFSRG
LVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGT
VIILCKAGVHEMADLHVMMLGKPTTLQSQFRLTYTMILNLLRVEALRVTDMMRRSFSENH
RDTQTQEKRISQLKQMVSSLPPLDTEGQLSDMLPYYHTVTELRITTEALQRAILESVNGL
KALSVGRVVLVNNKQHLNALGVILQVSCDAVNRTFTALVVCEKGNEEEEGKRNNTAFPHL
YNTALFIPEGPCSHTVQKLKLQDISAITVKTLKVIPDRIIDNYYKRQQPRFRLDPPGQAI
STATQELLRLAEANPSGMATLDPVNDLQLKSVEVVEDTMRRRVLQDGLREFNCIHSPTFA
EEFARVEERMKVQEELDRLLFLVSDQSLSLLPEYHQRIKVLQSLQYVDSSGAVQLKGRVA
CQISSHELLLTELLFENVLSPLAPEESAALLSCLVFQQKTQVEPHITSTLQEGIDRVLSV
AKRIGELQRECGIPQTAEEFVGQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTVVRCIQ
RLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggagaggataaacgtgccccccgcgggccccgcggacctgccgctgtccctgctggag
atggggtgctctggcaggtttgagctcatcacacacccatcactcgaccagccttttgct
cctcagagcacgctcccccacgggcttcctcccactagcctgagcctggagagagaggtg
gagaaacagtttttacaggacgctgcttggcttcctatacacgacacagactttgccttc
cagaagtttctcaaggtgactcggagagaagttagtgttgactctttaatcaactgtact
ccatctgcacttcactccggcgtctctgttgtcagagatccaaccacagggatgctgctg
gacttcacagaggtgttactggagaacactggcctgtcagcaaagaactcgctttcatta
catcgccaacccggccctccttcagagagccttcgtggaagcaacaccaactaccccttc
cgccccggaggaatggaggagctcactctggaccaaatcaagaagaaatctgatctagag
gcggacatagactttgagaatgatttactcagagtcccgcctggacttaaagccgggatg
gacttcactgacaaagatgccaagatagcaaaagcggaggtcacccttatgtccctcctg
tcaacattggatgacatcactgacttggaacctgtggcagaggagaaggaggagggcaaa
gaaagtgaggaagctcccaacctacccagaaccaacagcctggaagatctgggagtcaag
gatgttgtgtcatcctcgactccgtcagagagaggaaaagacgagaaattaaagccaaaa
gagaacccagaagaaaataagaagtgggccatccctgtcaacataaatgcaccctgcgat
gatttctataaacgcattcccaacccagctttcaagtggccgtttgagctggacgtcttc
cagaaacaggctgtgctaaagctggaggctcacgactctgtgtttgtagccgcgcataca
tcagctggcaaaacagtggtggccgaatacgccatcgccctctcccagaaacacatgaca
aggaccatctacacctctcccatcaaagccctgtccaatcagaagttcagagactttaaa
agcacctttggagatgtaggcctcctgacgggcgatgtccagctcagtcccgagtcttcg
tgtcttatcatgaccaccgagatcctccggtccatgctttacaacggctcagaggtcatc
agggacttggagtgggtgatctttgacgaggttcactacatcaacgacgccgagagaggg
gtcgtgtgggaggaggttttgatcatgcttcccgatcacgtcagcatcattctcctcagc
gccactgtgccaaacgctgtggagtttagcgagtggatcggtcggataaagaagaagcac
atctacgtgatcagcactatgaagagacctgtgcctttggagcattatctgtacactggg
aacagcaccaagactcagaaagagatgttcctgctgctggatgcgacaggaaacttcctc
actaaagggtactacgcagctgtcgatgccaagaaggagcgcactagcaaacacgcccaa
tcatttggcacgaagaatacttctcacagcaccacagctagtcaggaccgctcggtgtgg
ctcactctcctgcacttcctgtccaagcggcagcagacgccggtggtcgcgttcaccttc
tcacggacgcggtgtgatgacaacgcccgctcgctggactccatggacatgaccacctcc
atagaaaaggccgagattcactctttcttccagaagagtctgagtcgtctccgtggagca
gaccgacagctgcctcagatcttggtcatgagggacctgttgaagaggggaattgcagtc
catcatagcgggatcctgccgatactgaaggaggtcatcgagatgctcttctcgcgaggt
cttgtgaaggtgctgtttgccaccgagacgtttgctatgggagtgaacatgcccgccagg
actgtggtgttcgacagcatcaggaaacacgatggaaccggctttagaaacctgctgcca
ggcgagtatattcagatggcgggcagagcaggcaggagaggtctggacgccacaggcacc
gtcatcattctgtgtaaagccggagttcacgagatggcagacctgcatgtcatgatgctg
ggtaaacccaccaccctccagtcccagttcagactgacctacacgatgatcctcaacctg
ctgcgggtcgaagccctgcgcgtgaccgacatgatgaggaggagcttttctgagaaccac
agggacactcagacccaagagaagaggatcagccagctgaagcagatggtgtcttctctg
ccccctctggacacagaaggccagctgtcggacatgttgccttactaccacacggtgaca
gagctacgaatcaccaccgaggccctccagcgcgcgattctggagtccgtcaacgggcta
aaagctctttctgtgggtcgagttgtgttggtgaacaacaagcagcatctcaacgccctg
ggagttatcctacaggtatcctgtgacgccgtgaatcgcaccttcacggctctcgtcgtc
tgcgagaagggcaacgaggaagaggaaggaaaaagaaacaacaccgctttccctcacctc
tacaacacggctctctttatacccgaaggtccctgcagccacacagtgcagaagttaaag
cttcaggacatctcagccatcacagtgaaaaccctcaaagtgattcccgacaggatcatc
gacaactactacaagaggcagcagccacgattcaggctcgaccctcccggccaagccatc
tccacggcaacccaggagctcctgcgattggccgaggccaaccccagcggcatggcgacc
ctcgaccccgtgaacgacctccagttgaagagcgtcgaggtggtggaggacaccatgagg
cgccgcgtgctgcaggacggcctcagagagttcaactgcatccactcgcccacgttcgca
gaggagtttgctcgggtcgaggagaggatgaaagtccaggaggagctggacaggctgctg
ttcctggtgtcagaccagtctctgtctctgctgcctgaataccaccagaggatcaaggtg
ctgcagtccctccagtacgtcgacagcagcggggcggtgcagctgaagggccgcgtggcc
tgtcagatcagcagccacgagctgctgctgaccgagctgctgttcgagaacgtcctgagc
ccgctggcgcccgaggagagcgccgccctgctgtcctgcctggtcttccagcagaaaact
caggtggagccgcacatcaccagcacactgcaggagggcatcgatcgggtgctgtcagtg
gccaagcgtatcggagagctgcagagggaatgtgggataccacagacggctgaggagttt
gtcggccagttcaagtttggcctgacggaggtggtgtactgctgggccagaggcatgccg
ttcgccgagatcgcccagctgacggacgtccaggagggcacggtggtccgctgcatccag
cgcctggacgaggtgctgaaggaggtgcggcaggccgcccgcatcgtgggagactccgtc
ctgggcagcaagatggagaaggcgtccctggccattcgcagggacatcgtcttcaccgcc
tccctctacacccactga
DBGET
integrated database retrieval system
