Taurulus bubalis (long-spined sea-scorpion): 306749952
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Entry
306749952 CDS
T11969
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
tbu
Taurulus bubalis (long-spined sea-scorpion)
Pathway
tbu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
306749952 (ddx42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tbu03041
]
306749952 (ddx42)
Enzymes [BR:
tbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
306749952 (ddx42)
Spliceosome [BR:
tbu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
306749952 (ddx42)
Complex B
306749952 (ddx42)
Complex C
U2 SnRNP specific factors
306749952 (ddx42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
306749952
NCBI-ProteinID:
XP_079089442
LinkDB
All DBs
Position
17:<10764926..10771717
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AA seq
990 aa
AA seq
DB search
MNWNKGGPGVKRGFGFGGFSLAGKKEEPSAPQNSNLNTSFGPPGSSGYGKGQQLPSFYKI
GTKRANFDEENAYFEDDEEESSSNVDLPYIPAENSPTRQQMQSGGGSDSEDDPLDAFMAE
VENQAAKDMRKLEEKEKEKNSAKGIRDDIEEEDEQEAYFRYMAENPTAGLSLEDEDENID
YDSDGNPIAPLTKKIILPLPPIDHSEIDYPPFVKNFYNEHEELSVLTAIQELELRHKLNL
RVSGAAPPKPCTSFAHFNFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGS
GKTAAFIWPMLVHIMDQKELEAGDGPIAIIVCPTRELCQQIHAECKRFGKAYSLRSVAVY
GGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVSYLVFDEADRMFDMGFEYQV
RSVASHVRPDRQTLLFSATFRKKIERLARDILVDPIRVVQGDVGEANEDVTQMVEMLHST
TDKWGWLTRRLVEFTSSGSVLIFVTKKLNCEELATNLIQEGYSLGLLHGDMDQSERNKVI
SDFKKQNLPVLVATDVAARGLDIPSIRTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTL
LTNKDTTFAGDLVRNLEGANQAVSKELMDLAMQNPWFRKSRFKGGQGKRMNIGGGGLGYR
ERPGLGADSSERSGNFLSSTSSFEGYSKPTSGAMGDRMSAMRQAFQAQYKSHFVAASSGP
PKLTTKSNSSSCWTSAGSLSSVPTESANGSERSQSANLSMSMSGFTSAGTLSSVPASQIP
PQQSYPPAAPPPQRDIPRDLPRDLPRDRHGEDRGRHDSYRHADRIDRQSSEDRYGDRDRD
GDRERHGDRDRERHGDRDRHSSSRHTGDRNGDGSRRDREDRRGERDVGDRGSGEGRDRED
RRGERDGGDKGIGEGRDREDRRGERDGGDRWSGEGRDREDRRGERDGGDRGSGEGRDRED
RRGERDGGDRGDDSFAVPEPPKRRKSRWDN
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaaaggaggtccgggtgtgaagcgaggattcggatttggaggattttcc
cttgcaggtaaaaaagaagaacctagtgcacctcagaactcaaacttgaacacgtcattt
ggacccccgggatccagtggatatgggaagggccagcaactcccatcgttctacaaaata
gggacaaaaagagccaattttgatgaggaaaatgcgtattttgaggatgacgaagaagag
tccagcagcaacgttgatttgccgtacattccagctgagaactcgcccacacggcagcag
atgcagtctggcggtgggtcagacagtgaagatgacccactggacgccttcatggcagag
gttgagaaccaagcagctaaagacatgaggaaactagaggaaaaagaaaaggagaaaaat
tcagccaagggtattcgtgatgacattgaagaagaagatgaacaagaagcctacttccgc
tacatggcagagaatcccacagccgggctgagcctcgaggacgaggatgaaaacattgat
tatgacagtgacgggaacccaatcgcccccctcaccaagaaaattattttgccacttccc
cctattgaccactcagagattgattacccaccctttgtgaaaaacttttacaatgagcat
gaagagctcagtgtcctgactgcaattcaagagttggagttaaggcacaaattgaattta
agggtatcgggtgcagcccctccaaaaccttgtactagttttgctcacttcaactttgat
gagcagttaatgcaccaaatccgcaagtcagagtacactcagcccacaccgattcagtgc
cagggtgtgcccatagctctgtctggacgtgacatgattggtattgcaaaaacgggcagt
ggcaaaactgcagcttttatctggcccatgctggttcacatcatggatcaaaaggaactg
gaggccggagatgggcccatcgccatcattgtgtgtcccaccagagagctttgtcagcag
atccatgcagaatgtaagcgtttcgggaaagcctactctttgcgttctgtggcagtttat
ggaggaggcagcatgtgggagcaggccaaggctctgcaggagggagcggagattgtggtc
tgcactccgggtcgtctgattgaccatgtgaaaaagaaggccacgtccctgcagagagtg
tcatacctggtgtttgatgaggcagatcgcatgtttgatatgggttttgaatatcaggtt
agatctgttgcaagccatgtccgcccagacagacagacccttctgtttagtgctactttt
cgaaagaagatagagaggcttgccagagacatcttggtcgatcctatccgcgtggtgcag
ggagacgtcggagaggccaatgaggatgtcacccagatggtggagatgctgcacagcacg
acggataaatggggctggctgacccggcggctggtggagttcacctcctccggctcagtc
ctcatctttgtcactaagaagttaaactgtgaggaactagctaccaacctgatccaggag
ggttacagcctgggcctcctgcacggagacatggaccaaagtgagaggaacaaagtcatc
agcgacttcaagaaacagaacttgcctgttctggtggccactgatgtagctgctcgtggt
ctggacatcccatccatccgtacagtgataaactacgacgtggcacgagacatcgacacg
cacacacacaggattggtcgaactggtcgtgctggagagaagggcgtggcttacactctc
ctcaccaacaaagacacgacattcgctggtgacctcgtgagaaatctagagggcgccaat
caagctgtttccaaagaactgatggatttagccatgcagaatccctggttcaggaaatcc
agattcaagggtggtcaaggaaagagaatgaatattggcggaggaggtcttggttacaga
gagagacccggcctgggggctgatagttctgaacgcagcggcaactttttgtcttccact
agtagctttgaaggctacagcaaaccaacctctggggcaatgggagatcgcatgtctgct
atgagacaagccttccaggctcagtataagagccactttgtggctgcgtccagcggccct
ccgaagcttaccactaagtctaacagctcgtcatgctggacgagtgccggcagcctgagc
tccgtgccgactgagtccgccaatggttccgagcggtcccagagtgccaacttgtccatg
tccatgtccggcttcaccagcgccggcaccctgagctctgtgcccgccagtcaaatccct
ccacagcagagctaccctccggccgcgcctcccccacagagagacatccctcgggacctc
cctcgggacctccctcgggacagacacggggaggaccgggggcgccacgacagttaccgc
cacgccgacaggatcgatcgacaaagcagtgaggatcgctacggagaccgggatcgagac
ggagaccgggaacgccacggagacagagatcgcgaacgccacggggaccgggaccgccac
agcagcagccgccacaccggcgatcgcaatggagatggaagcaggagggacagagaggat
cgtaggggtgagagggatgtcggagacagaggaagtggagaggggagggatcgagaggat
cgtaggggtgagagagacggtggagacaagggaattggagaggggagggaccgagaggat
cgtaggggtgaaagggatgggggagacaggtggagtggagaggggagggacagagaggat
cgtaggggtgaaagggatgggggagacagggggagtggagaggggagggacagagaggat
cgtaggggtgagagggacgggggagacaggggagacgatagctttgctgtccctgaacca
ccaaagcgtagaaagagcaggtgggacaactaa
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