Thermomonas brevis: H9L17_00130
Help
Entry
H9L17_00130 CDS
T06816
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
tbv
Thermomonas brevis
Pathway
tbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H9L17_00130 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbv03400
]
H9L17_00130 (sbcB)
Enzymes [BR:
tbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
H9L17_00130 (sbcB)
DNA repair and recombination proteins [BR:
tbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H9L17_00130 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9L17_00130 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L17_00130 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNN46640
UniProt:
A0A7G9QTG5
LinkDB
All DBs
Position
complement(29270..30718)
Genome browser
AA seq
482 aa
AA seq
DB search
MSASFLFYDLETFGIDPRRSRIAQFAAIRTDAELNEIDEPISFFVQPADDLLPSPGAALV
TGIAPQDALRDGVNEAAAFARIMEEMGRPETCTVGYNSLRFDDEFVRYGLYRNFFDPYER
EWRGGNSRWDLLDALRLMHALRPDGIAWRPREDGKGTSFRLEHLAEDNGLRVGEAHEALS
DVRALIGVARLFRRAQPRLWEYALRLRDKRFAASLLDTVAMAPLLHVSQRYPATRLCAAP
VLPLARHPQIDSRVIVYDLDCEPDALLDLDAEAIAARLYVRQEDLPDGETRIPLKEVHVN
KCPALVRWDHLRAADFARLGIDPETALARAERIRAAGPALAEKMRRVFARERPAGDVDAD
AALYDGFIGDGDKRLCAQVRGTPPHLLAKAQYAFRDARLPELLLRYRARNWPDSLLPAER
GQWDDYRRRRLLGDAGLSETTLAQYRAEIAALRTEYADDGARLALLGRLADWGDGLAAGL
GD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccagcttccttttctacgacctcgaaaccttcggcatcgacccgcgccgcagc
cgcatcgcccagttcgcggcgatccgcaccgacgccgaactgaacgagatcgacgagccg
atcagcttcttcgtgcagccggccgacgacctgctgccctcgcccggcgccgcgctggtc
accggcatcgccccgcaggacgcgctgcgcgacggcgtcaacgaggccgccgcgttcgcc
cgcatcatggaggaaatgggccggccggagacctgcaccgtcggctacaactcgctgcgt
ttcgacgacgagttcgtccgctacgggctgtaccgcaacttcttcgatccctacgagcgc
gagtggcgcggcggcaactcgcgctgggacctgctcgacgcgctgcggctgatgcacgcg
ctgcgccccgacggcatcgcctggcgcccgcgcgaggacggcaagggcaccagcttccgg
ctggaacacctcgccgaggacaacggcctgcgcgtcggcgaggcgcacgaagcgctgtcc
gacgtgcgcgcgctgatcggcgtcgcccgcctgttccgccgggcgcagccgcgcctgtgg
gagtacgcgctgcgcctgcgcgacaagcgcttcgccgcttcgctgctggacacggtggcg
atggcgccgctgctgcacgtctcgcagcgctacccggccacgcgcctgtgcgccgcgccg
gtgctgccgctggcgcggcatccgcagatcgactcgcgggtcatcgtgtacgacctcgac
tgcgagccggacgccttgctcgacctcgacgccgaggccatcgccgcgcgcctgtacgtt
cgccaggaagacctgccggacggcgagacccgcatcccgctgaaggaagtgcacgtcaac
aagtgtccggcgctggtgcgctgggaccacctgcgcgccgccgacttcgcccgcctcggc
atcgatccggaaacggcgctggcgcgcgccgaacgcatccgcgccgccggcccggcgctg
gccgagaagatgcgccgcgtgttcgcgcgcgaacgcccggccggcgacgtggatgcggac
gccgcgctgtacgacggcttcatcggcgacggcgacaagcgcctgtgcgcgcaggtgcgc
ggcaccccgccgcacctgctggcgaaggcgcaatacgctttccgcgacgcgcgcctgccc
gagctgctgctgcgctaccgcgcccgcaactggccggacagcctgctgccggcggaacgc
gggcaatgggacgactatcgccgccggcgcctgctgggcgacgccggcctgtccgaaacc
acgctggcgcagtaccgcgcggagatcgccgcgctgcgcaccgagtacgcggacgacggc
gccaggctcgccctgctgggccggctggccgactggggcgacggcctcgccgccggcctc
ggcgactga
DBGET
integrated database retrieval system