Thermomonas brevis: H9L17_09270
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Entry
H9L17_09270 CDS
T06816
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tbv
Thermomonas brevis
Pathway
tbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L17_09270 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbv03019
]
H9L17_09270 (rhlB)
Enzymes [BR:
tbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L17_09270 (rhlB)
Messenger RNA biogenesis [BR:
tbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L17_09270 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RhlB
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNN45422
UniProt:
A0A7G9QPZ7
LinkDB
All DBs
Position
2020266..2021978
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AA seq
570 aa
AA seq
DB search
MSDKPLTDITFSTFELAPALQTGLETAGFTRCTPIQAMTLPVALAGGDVAGQAQTGTGKT
LAFLVAVIDRLLKRPALADRKPEDPRALILAPTRELAIQIHKDAMKFASDLGLKFALVYG
GVDYDKQREQLQRGADVIIATPGRLIDYVKQHKVVSLHACEVCVLDEADRMFDLGFIKDI
RFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPQKLVVEAETITAARVRQKLYYPA
DDEKLPLLLGLLSRSEGARTMVFVNTKAFVERVARALERAGYRVGVLSGDVPQKKRESLL
KKFQAGQLEILVATDVAARGLHIDGIKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF
ACERYAMSLPDIEAYIEQKIPSEPVTQELMTALPRPERPKPAEGESDDGDSIGEIFREVR
EARAAEDAKRGGGRGGRSSGGRSGERSGSGERRSGEGRGPRPPRKPRVEGEAAAPPKPVV
PAPAQAAVAEGDAPARKRRRRRRGRPVEGAEGAVQAHAQAGQPAKPASPKYVPANRSASA
AAPAADKPSLLSRIGRGLKSLVTRSPSKQH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaagcccctgaccgacatcaccttttccaccttcgaactggcccccgcgctg
caaaccgggctggagaccgccggcttcacccgctgcacgccgatccaggcgatgaccctg
ccggtggcgctggccggcggcgacgtcgccggtcaggcgcagaccggcaccggcaagacc
ctggccttcctggtcgcggtgatcgaccgcctgctcaagcgcccggcgctggccgaccgc
aagccggaagacccgcgcgcgctgatcctggcgccgacccgcgagctggcgatccagatc
cacaaggacgcgatgaagttcgcctccgacctcggcctgaagttcgcgctggtctacggc
ggcgtcgattacgacaagcagcgcgagcagctgcagcgcggcgccgacgtcatcatcgcc
acgccgggccggctgatcgactacgtcaagcagcacaaggtggtcagcctgcacgcctgc
gaggtgtgcgtgctggacgaggccgaccgcatgttcgacctcggcttcatcaaggacatc
cgcttcctgctgcggcgcatgccggagcgcggcacccgccagaccctgctgttctcggcc
acgctcagccaccgcgtgctggagctggcctacgaacacatgaacgagccgcagaagctc
gtggtcgaggccgagaccatcaccgccgcgcgcgtccgccagaagctctactacccggcc
gacgacgagaagctgccgctgctgctgggcctgctgtcgcgcagcgaaggcgcgcggacg
atggtgttcgtcaacaccaaggcgttcgtggagcgcgtcgcgcgcgcgctggagcgggcc
ggctaccgcgtcggcgtgctgtccggcgacgtgccgcagaagaagcgcgagtcgttgctg
aagaagttccaggccggccagctggaaatcctggtcgccaccgacgtggccgcgcgcggc
ctgcacatcgacggcatcaagtacgtctacaactacgacctgccgttcgacgccgaggac
tacgtgcaccgcatcggccgcaccgcacggctgggcgaggaaggcgacgcgatcagcttc
gcctgcgagcgctacgcgatgtcgctgccggacatcgaggcctacatcgagcagaagatc
ccgtccgagccggtcacgcaggagctgatgaccgcgctgccgcgcccggaacggccgaag
ccggccgagggcgaaagcgacgacggcgacagcatcggcgagatcttccgcgaggtgcgc
gaggcgcgcgccgccgaggacgccaagcgcggcggtggccgcggcgggcgcagcagcggc
gggcgttccggcgagcgcagcgggtccggcgaacgccgcagcggcgagggccgcggcccg
cgtccgccgcgcaagcctcgcgtggaaggcgaggccgccgcgccgccgaagcccgtcgtc
cccgcgccggcgcaggcggcggtggccgagggcgatgcgccggcgcgcaagcgtcgccgc
cgtcgtcgcggccgtccggtcgagggcgcggaaggcgcggtgcaggcgcacgcgcaggcg
gggcagcccgccaagcccgcgtcgccgaagtacgtgccggcgaaccggtccgcctccgct
gccgcgccggccgccgacaagccgtcgctgctcagccgcatcggccgcggcctgaagtcg
ctggtgacgcgctcgcccagcaagcagcactga
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