Thermomonas brevis: H9L17_11525
Help
Entry
H9L17_11525 CDS
T06816
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
tbv
Thermomonas brevis
Brite
KEGG Orthology (KO) [BR:
tbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbv03019
]
H9L17_11525 (hrpA)
Enzymes [BR:
tbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H9L17_11525 (hrpA)
Messenger RNA biogenesis [BR:
tbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H9L17_11525 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
DEAD
HA2_N
HA2_C
AAA_19
AAA_22
nSTAND3
SRP54
Cas3-like_C_2
AAA_23
NACHT
T2SSE
AAA_30
TsaE
ABC_tran
FtsK_SpoIIIE
PhoH
Motif
Other DBs
NCBI-ProteinID:
QNN45820
UniProt:
A0A7G9QR45
LinkDB
All DBs
Position
2503654..2506929
Genome browser
AA seq
1091 aa
AA seq
DB search
MEAIGAEAKSASRQARRAIDGALTRDRGRLLGLWSKWNAKPGDAALRDAFSAKLQASVAE
RERRAAALPSATVDAALPIAAHADEIVDLIRSHQVVVIAGETGSGKTTQLPKLCLLAGRG
AAGMVGCTQPRRIAARSVARRVAEELQVPLGGAVGFQVRFNDAVGDTTAIKFMTDGILLA
EIQNDRWLSKYDTLIIDEAHERSLNIDFLLGYLKQLLPKRPDLKLVVTSATIDTARFAAH
FGDAPVVSVEGRGYPVEVRYRPLEGEGGHADAPASGAAGGEGGQRTIVDGIVAACDEIQR
EKGIGDVLIFLPGEREIRDAHQALEKRKYRHTEVLPLYARLSAKDQDRVFHPGPQRRIVL
ATNVAETSLTVPRIHYVVDPGVARVKRYSPRQKLDRLHIEDVSQASANQRAGRCGRIAPG
VCIRLYSEADFASRPEFTDPEIRRAALAGVILRMLALGLGDIENFPFLEPPDPRAIADGW
QQLNELGAVDADRKLTAIGRTMAKLPVDVKLARMLVAAQAHGVLREMLVIASFLGIQDPR
ERPADARAAADAAHAQFVDAKSEFVGILKLWDAYRVAHEEMTQSQLRKWADRNFLGFLRL
REWWELHRQLKLQCEELQWDRHAREGGHPASSASEQKTLDTQTQGLRKDARFRGNDEQKQ
YAALHRALIAGLPTQLGNRGDKGLYDGPRGRKFHLFPGSRLASKPPPWLLSATLLDTEKV
WAITNAAIEPDWAIAELPHLLARRHHDPHWSRSQGRVVGSEQISLFGLVLAPKKPVHYGA
LFPEESRAIFVREALLTGEINTRSAFLARNLRALELARQEEAKQRRVGLVVDEDWQARWY
LDRLPAHVHNAQALDAWYAKLSKDEKAALEWSRDDLLVADQTDAARFPAYLPLGDARLAV
QYRFEPGAVDDGMTVAVPLHLLNALDAARLSWLAPGFVEDKAAALIRSLPKALRRNFVPA
PDFARAFAEAFAQPDADSIEGALAKFLKKLSGVEVSALDFDAAAIEPHLRANLRLLDVPA
PPLAREAGRGGREGVLCAKSTPPQPSPCALRRGRALSWPNRATSTTCAPASANAPRRRSP
AMRRRAWRSRA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatcggagccgaagcaaaatccgcctccaggcaggcccggcgcgccatcgac
ggcgcgctgacccgcgaccgcggccgcctgctcggcctgtggtcgaagtggaacgcgaag
ccgggcgatgcggccctgcgcgacgcgttctcggcgaagctgcaggcgtcggtggccgaa
cgcgagcgccgcgccgccgcgctgccgtcggcgacggtcgatgcggcgctgcccatcgcc
gcgcatgccgacgagattgtcgacctgatccgcagccaccaggtggtggtgatcgccggc
gaaaccggcagcggcaagaccacccagttgcccaagctctgcctgctggccgggcgcggc
gcggcgggcatggtcggctgcacccagccgcgccggatcgccgcgcgctcggtggcgcgg
cgcgtggccgaggagctgcaggtgccgctgggcggcgcggtcggcttccaggtgcgcttc
aacgacgcggtgggcgacaccaccgcgatcaagttcatgaccgacggcatcctgctggcg
gaaatccagaacgatcgctggctgtcgaagtacgacacgctgatcatcgacgaggcgcac
gagcgcagcctcaacatcgacttcctgctcggctacctgaagcagctgctgccgaagcgg
cccgacctgaagctggtggtgacttccgccaccatcgataccgcccgcttcgccgcgcat
ttcggcgatgcgccggtggtcagcgtggaaggacgcgggtatccggtcgaggtgcgctat
cggccgctggaaggcgagggcggacatgccgatgcgcctgcgtccggggccgcgggcggc
gaaggcgggcagcgcacgatcgtcgacggcatcgtcgccgcctgcgacgagattcagcgg
gagaagggcatcggcgacgtgctgatcttcctgcccggcgagcgcgagatccgcgacgcc
caccaggcgctggagaagcgcaagtaccgccacaccgaagtgctgccgctgtacgcgcgg
ctgtcggcgaaggaccaggaccgggtattccaccccggtccgcagcggcgcatcgtgctg
gcgaccaacgtggcggaaacctcgctgacggtgccgcgcatccactacgtggtcgatccc
ggcgtggcgcgggtgaagcgctacagcccgcggcagaagttggaccgcctgcacatcgag
gacgtgtcgcaggccagcgccaaccagcgtgccggccgctgcgggcgcatcgcgcctggc
gtgtgcatccgcctgtattcggaagcggatttcgcgtcgcggcccgagttcaccgatccg
gaaatccgccgcgccgcgctggcgggcgtgattctgcgcatgctggcgctgggcctcggc
gacatcgagaatttcccgttcctcgaaccgcccgatccgcgcgcgatcgctgacggctgg
cagcagttgaacgaactcggcgcggtcgatgcggatcgcaagctcaccgccatcggcagg
acgatggcgaagctgccggtggacgtgaagttggcgcgcatgctggtggccgcgcaggcg
cacggcgtgctgcgcgagatgctggtgatcgccagcttcctcggcatccaggacccgcgc
gagcgcccggccgacgcgcgcgccgccgccgatgccgcgcatgcgcagttcgtcgacgcg
aagtcggagttcgtcggcatcctcaaactgtgggacgcctaccgcgtcgcgcacgaggag
atgacccagtcgcagctgcgcaaatgggccgaccgcaatttcctcggcttcctgcgcctg
cgcgagtggtgggagctgcatcggcaattgaagttgcaatgcgaggagttgcaatgggat
cgtcatgcccgcgaaggcgggcatccagcgtcttcggcttccgaacaaaagacactggat
acgcagactcaaggtctgcgaaaagacgcccgctttcgcgggaatgacgagcaaaagcaa
tacgccgccctccaccgcgccttgatcgccggcctgcccactcaactcggcaaccgcggc
gacaaaggcctctacgacggcccgcgtggccgcaagttccacctgttccccggctccagg
ctggcgagcaagccgccgccgtggctgctgtcggcgacgctgctggacaccgagaaagtc
tgggcgatcaccaacgccgccatcgagccggactgggcaattgccgaattgccgcacctg
ctggcccgccgccaccacgacccgcactggtcgcgttcgcagggccgcgtcgtcggcagc
gagcagatcagcctgttcgggctggtgctggcgccgaagaagccggtgcactacggcgcg
ctgtttccagaggagagccgcgcgatcttcgtgcgcgaggcgctgctgaccggcgagatc
aacacccgcagcgccttcctcgcccgcaacctgcgcgcgctggagctggcgcggcaggag
gaagccaagcagcgtcgcgtcgggctggtggtggacgaggactggcaggcccgctggtac
ctcgaccggctgcccgcgcacgtgcacaacgcgcaggcgctggatgcgtggtacgcgaag
ttgtcgaaggacgagaaggcggcgctggagtggtcgcgcgacgacctgctggtggccgac
cagaccgacgccgcgcgcttccccgcctacctgccgctgggcgatgcacggcttgcggtg
cagtaccgcttcgagccgggcgcggtggacgacggcatgaccgtggcggtgccgctgcac
ctgctcaacgcgctggacgcagcaaggctgtcgtggctggcgccgggcttcgtcgaggac
aaggcagcggcgctgatccgctcgctgccgaaggcgctgcggcgcaacttcgtgcccgcg
ccggacttcgcacgcgccttcgccgaggcgtttgcgcagccggacgcggattccatcgag
ggcgcgctggcgaaattcctgaagaagctctcgggcgtcgaggtgtccgcgctggatttc
gacgccgccgccatcgagccgcacctgcgtgcgaacctgcggctgctggatgtccctgct
cctccccttgcccgcgaagcggggaggggaggtcgggagggggtgctgtgcgcgaagagc
acccctccccaaccctccccttgcgcgctgcgcagagggagggcgttgtcctggccgaat
cgcgcgacctcgacgacctgcgcgcccgcttcggcgaacgcgccgcgcaggcgttcgccc
gccatgcggcgcagggcatggcgaagtcgggcatga
DBGET
integrated database retrieval system
