Thermomonas brevis: H9L17_13020
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Entry
H9L17_13020 CDS
T06816
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tbv
Thermomonas brevis
Pathway
tbv03030
DNA replication
tbv03430
Mismatch repair
tbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L17_13020 (dnaE)
03430 Mismatch repair
H9L17_13020 (dnaE)
03440 Homologous recombination
H9L17_13020 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbv03032
]
H9L17_13020 (dnaE)
03400 DNA repair and recombination proteins [BR:
tbv03400
]
H9L17_13020 (dnaE)
Enzymes [BR:
tbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L17_13020 (dnaE)
DNA replication proteins [BR:
tbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9L17_13020 (dnaE)
DNA repair and recombination proteins [BR:
tbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9L17_13020 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QNN46096
UniProt:
A0A7G9QRX1
LinkDB
All DBs
Position
complement(2800014..2803634)
Genome browser
AA seq
1206 aa
AA seq
DB search
MPARFVHLHLHTEFSLVDSTIRVPEKPDYARPEKAGDRPNLLSRAVELNLPALAVTDRNN
LFALVKFYKAAESVGIKPIAGSDVMIADGGDAPSMLTLLCRDHTGYLSLSRLLSRAWLEG
QRGDCVAIDPEWLRDDHAGLFAIAGRASLAGRLALANRHDLAEAQLAEWRRVFGDDLHLE
LTRTGREGDEAFNRFALHASGKLGLPVVASNDVRFLDAAGFDAHEARVCIASGRVLDDPR
RPRDYSAEQYLKSTEDMAALFADVPDALDNTVALAQRCNIQLKLGTYFLPAYPVPSDETL
DSWIRSESRAGLEARLQKNPLAPGKTREDYDARLEFELDTICKMGFPGYFLIVADFIQWG
KNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDRR
DEVIDYVARKYGRDRVSQIITYGTMAAKAVLRDTGRVLGFGYGMVDGIAKLIPNILGISL
KDAMGQGKGGMDGEMASPDLIQRYNSEDDVRDLIDLALQLEDLTRNAGKHAGGVVISPSP
LSDFCPLFAEHDHGTLGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINARRA
TEGKDALDIAAIPLDDASVYRDVFANGNTGSVFQFESSGMRRALKDAKPDRFEDLIALNA
LYRPGPMEMIPSFVARKHGTEEFEYPDPRTRAMLQETYGIMVYQEQVMQMAQIVGGYSLG
GADLLRRAMGKKVPAEMAKHREIFREGAAKGGVDGPKADEIFDLMEKFAGYGFNKSHAAA
YSLVAYQTAWLKKHYPAEFMAATLSSDMDKTEKVVGFLDEARGLGLTVLPPDANASTYMF
EATAPDTIRYGLGAVKGVGQGVCEAIVAARRPRMDECRGRQDAGSGRAEGGAFRDLLDFC
QRVSAAGLNKRTMEALIHSGAMDALAVNRASLMLQLPEALKATDQMAKNREAGMFDMFGG
GSTDIRIELPETTEWPLAQLLQGEHDTLGHYLSGHPMDPYRDDVQKLVGHDLSALDAIWE
SGSRNNRPQEGRSWRPMVQTVVAGQVIGMRKRGDSQAFVQLEDGRGRIECGFFNEQWTEF
AQLLTRDRILVVEGGLREDEFNGGFSLRASRCWDFAQICGQQAQRISIRIDLREPGALQQ
FEQVLKAHAGPTPVLLEAATAAGIGRLTLNGGRGLRVDAALPGLLRSLPGVSTVSVQLAR
PWATSH
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgtttcgtccatctgcacctgcacaccgagttctcgctcgtggattccacc
atccgcgtgcccgagaagccggactatgcgcgcccggaaaaggccggcgaccggcccaac
ctgctcagccgcgcggtggagctgaacctgccggcgctggcggtgaccgaccgcaacaac
ctgttcgcgctggtcaagttctacaaggcggcggaaagcgtcggcatcaagcccatcgcc
ggcagcgacgtgatgatcgccgatggcggcgacgcgccgtcgatgctgaccctgctgtgc
cgcgatcacaccggctacctcagcctgtcgcgcctgctcagccgcgcgtggctggaaggc
cagcgcggcgactgcgtcgccatcgatccggaatggctgcgcgacgatcacgccggcctg
ttcgccatcgccggccgcgccagcctggccggacgcctggcgctggccaaccgccacgac
ctcgccgaagcgcagctcgccgaatggcggcgcgtgttcggcgacgacctgcacctggag
ctgacccgcaccggccgcgagggcgacgaagccttcaaccgcttcgccttgcacgcctcc
ggcaagctcggcctgccggtagtcgccagcaacgacgtgcgcttcctcgacgccgccggc
ttcgacgcgcacgaggcgcgcgtctgcatcgcctccggccgcgtgctggacgacccgcgc
cgcccgcgcgactacagcgccgagcagtacctgaaatcgaccgaggacatggcggcgctg
ttcgccgacgtgccggacgcgctcgacaacacggtcgcgctggcgcagcgctgcaacatc
cagctcaagctcggtacgtacttcctgccggcctatccggtgccgtcggacgagacgctg
gacagctggatccgcagcgagtcccgcgccggcctggaagcgcgtctgcaaaaaaatccg
ctcgctcccggcaagacccgcgaggactacgacgcgcggctggagttcgagctggacacc
atctgcaagatgggcttccccggctacttcctgatcgtggccgacttcatccagtggggg
aagaaccagggcatccccatcggccccggccgcggctccggcgccggctcgctggtggcg
tgggcgctgcagatcaccgatctcgacccgctgccgtacaacctgctgttcgagcgcttc
ctgaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccggcgc
gacgaggtgatcgactacgtcgcgcgcaagtacggccgcgaccgcgtcagccagatcatc
acctacggcacgatggcggcgaaggcggtgctgcgcgataccgggcgcgtgctcggcttc
ggctatggcatggtggacggcatcgccaagctgatcccgaacatcctcggcatttcgctg
aaggacgcgatgggccagggcaagggcgggatggacggcgagatggcctcgcccgacctg
atccagcgctacaacagcgaggacgacgtccgcgacctgatcgacctcgccctgcagctg
gaagacctcacccgcaacgccggcaagcacgccggcggcgtggtgatctcgccctcgccg
ctgtccgatttctgcccgctgttcgccgaacacgaccacggcacgctgggcaagaacccg
gtcacccagttcgacaaggacgacgtggaagccgtcggcctggtgaagttcgacttcctc
ggtctgcgcaccctgaccatcatcgactgggcggtgaaggcgatcaacgcgcgacgtgcg
acggagggcaaggacgcgctcgacatcgccgcgatcccgctggacgacgccagcgtctac
cgcgacgtgttcgccaacggcaataccggctcggtgttccagttcgaatcctccggcatg
cggcgcgcgctgaaggacgcgaaacccgaccgcttcgaggacctgatcgcgctgaacgcg
ctgtaccgccccggcccgatggaaatgattccgtcgttcgtggcgcgcaagcacggcacc
gaggagttcgaataccccgatccgcgcacccgggccatgctccaggagacctacggcatc
atggtctaccaggagcaggtcatgcagatggcgcagatcgtcggcggctactcgctgggc
ggcgccgacctgctgcgccgcgcaatgggcaagaaggtgccggccgaaatggccaagcac
cgcgagatcttccgcgaaggcgcggccaagggcggcgtggacggccccaaggccgacgaa
atcttcgacttgatggagaagttcgccggctacggcttcaacaagtcgcacgcggccgct
tactcgctggtcgcctaccagaccgcgtggctgaagaagcactacccggccgagttcatg
gcggccacgctgtcctcggacatggacaagaccgagaaggtggtgggcttcctcgatgaa
gcgcgcggcctcgggctgaccgtgctgccgccggacgcgaacgcctccacctacatgttc
gaggcgaccgcgccggacaccatccgctacggcctcggcgcggtgaagggcgtgggtcag
ggcgtgtgcgaggccatcgtggcggcgcgacgtccaaggatggacgagtgccgcgggagg
caggatgccgggagcggccgcgcggaaggcggcgcgttccgcgacctgctcgacttctgc
cagcgcgtctccgccgccggcctcaacaagcgcaccatggaagcgctgatccattccggt
gcgatggacgcgctggcggtcaaccgcgcctcgctgatgctgcagctgccggaggcgctg
aaggccaccgaccagatggcgaagaaccgcgaggccggcatgttcgacatgttcggcggc
ggcagcaccgacatccgcatcgaactgccggaaaccaccgagtggccgctggcgcagttg
ctgcagggcgagcacgacacgctggggcactaccttagcgggcatccgatggacccgtac
cgcgacgacgtgcagaagctggtcggccacgacctgtccgcgctggacgcgatctgggaa
agcggctcgcgcaacaaccgcccgcaggaaggccgcagctggcggccgatggtgcagacg
gtggtggccggacaggtgatcggcatgcgcaagcgcggcgattcgcaggcgttcgtgcag
ttggaggacgggcgcgggcggatcgaatgcggcttcttcaacgagcagtggacggagttc
gcccaactgctcacccgcgaccgcatcctggtggtcgagggcggcctgcgcgaggacgag
ttcaacggcggcttctcgctgcgcgccagccgctgctgggatttcgcgcagatctgcggc
cagcaggcgcagcggatctcgatccgcatcgatctgcgcgagccgggcgcgctgcagcag
ttcgagcaagtgctgaaggcccacgccggccccacccccgtgctgctggaggccgccacc
gccgccgggatcggccggctgaccctgaacggcggccgcggtctgcgcgtggacgccgcc
ctgcccggcctgctgcgcagcctgccgggcgtcagcacggtcagcgtgcagctggcccgg
ccgtgggcgacatcgcactga
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