Trueperella bialowiezensis: NCTC13354_00437
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Entry
NCTC13354_00437 CDS
T05959
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCTC13354_00437 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbw03019
]
NCTC13354_00437 (orn)
03009 Ribosome biogenesis [BR:
tbw03009
]
NCTC13354_00437 (orn)
Messenger RNA biogenesis [BR:
tbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC13354_00437 (orn)
Ribosome biogenesis [BR:
tbw03009
]
Eukaryotic type
Pre-60S particles
RNases
NCTC13354_00437 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
VEI12745
UniProt:
A0A448PCV6
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All DBs
Position
1:466264..466869
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AA seq
201 aa
AA seq
DB search
MTGLDLDVDSIVEIAVVVTDSELFPLDDGLRIVIKPTAQAVEQMDPYVRDMHTATGLINM
WDDGVSLADAEAAVMAYIERFVPEPRRAPLGGNSVGTDRSFIARDMPTLDAHLHYRIIDV
SSIKELAKRWYPRTYFAAPEKTGNHTALGDIYDSIDELRYYRAVLFPDGEGPSTEESQEI
ARQIESDLTRSRAQQAAKDER
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcctcgatctggacgtcgactcgatcgtggagatcgccgtcgtcgtcaccgat
tcggaactcttccccctcgacgacggcctgcggatcgtcatcaaaccaaccgctcaagcc
gtggaacagatggatccatacgtacgcgatatgcacaccgccaccggcttgatcaacatg
tgggacgacggcgtgagccttgccgacgccgaagccgccgtcatggcctatatcgaacgt
ttcgtacccgaaccgcgccgagcaccactgggcggaaactcggtcggcaccgacaggtcg
tttattgcacgcgacatgcccacacttgacgcccacttgcactaccggatcatcgacgtc
tcatccatcaaggaactggccaaacgctggtatccacgcacctattttgctgcccccgaa
aagacgggcaaccataccgcgctcggcgacatctatgattccatcgatgaacttcgctac
taccgggccgtgctcttccccgacggcgaaggccccagcaccgaagaatcacaggagatc
gcacgccagatcgaaagcgatctcacgcggtcccgtgcccagcaggctgcgaaggacgaa
cggtga
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