Trueperella bialowiezensis: NCTC13354_00515
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Entry
NCTC13354_00515 CDS
T05959
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC13354_00515 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbw03021
]
NCTC13354_00515 (rpoA)
03400 DNA repair and recombination proteins [BR:
tbw03400
]
NCTC13354_00515 (rpoA)
Enzymes [BR:
tbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC13354_00515 (rpoA)
Transcription machinery [BR:
tbw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC13354_00515 (rpoA)
DNA repair and recombination proteins [BR:
tbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC13354_00515 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
UBA_8
Motif
Other DBs
NCBI-ProteinID:
VEI12821
UniProt:
A0A448PD04
LinkDB
All DBs
Position
1:complement(559320..560318)
Genome browser
AA seq
332 aa
AA seq
DB search
MIIEQRPTLTEEKISDTRSRFTLDPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVHIDGVL
HEFSTIAGCKEDVAEIILNLKELVVTSEHDEPVLMYLRKQGPGEVLASDITPPSGVEIHN
PDLVIATLNDKGKIEVDLTVERGRGYVSAAQNNSPDYEIGRIPIDSIYSPVVKVSYKVEA
TRVGQRTDFDKLIVDVETKPSTAPRDAFASAGKTLVELFGLTTELNEEVEGLELKEAPVV
EQQSSDLQHPITILNLPARSQNCLQREGIHTIGELVMRSEADLLDIRNFGAKSIEDVKDE
LAKLDLRLKDSPAGYMSGFGEESYGMQFSDDA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgatcattgaacagcgacccactctcacggaagagaagatttccgatacgcgttcgcgt
ttcacgctcgatccgctcgagccgggtttcggctacacgctgggtaactccctgcgccgt
acgctgctttcgtcgattccaggtgcagctgtcacgtcggtacatatcgacggcgtcctg
cacgagttttcgacgattgctggctgcaaagaagatgttgccgagatcattttgaacctg
aaggaactcgttgtgacctctgagcacgacgaaccggttctcatgtatctgcgtaagcaa
gggccaggcgaagtgctggcttcggatatcaccccgccgtcgggcgtggaaatccacaac
ccggatctggttattgccacgttgaatgacaagggcaagatcgaggttgacctgactgtc
gagcgtggccgcgggtatgtctctgccgcgcagaacaactccccggactacgagatcggt
cggatcccgattgattcgatctactcgcctgtcgtcaaggtttcctacaaggtggaggcc
acccgtgtgggccagcgtaccgatttcgacaagctgatcgtcgacgtcgagaccaagccg
tccactgcgcctcgtgacgcgtttgcgtcagccggtaagacgctcgtcgaactgttcggg
ctgaccaccgagctgaacgaagaagtcgaaggcctcgaactgaaggaagccccggttgtc
gagcagcagtcctcggacctgcagcacccgatcacgatcttgaatctgcctgctcgttcg
cagaactgtctgcagcgtgaaggtattcacacgatcggtgaacttgtgatgcgttctgaa
gctgatcttcttgatattcgtaacttcggtgcgaagtcaatcgaggatgttaaggacgag
cttgccaagcttgatctgcgtttgaaggattcgcctgccggctacatgtccgggttcggt
gaagaatcctacggcatgcagttcagcgacgacgcataa
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