Trueperella bialowiezensis: NCTC13354_00822
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Entry
NCTC13354_00822 CDS
T05959
Name
(GenBank) Alpha-agarase precursor
KO
K20276
large repetitive protein
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC13354_00822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RibLong
Big_6
Big_9
Rib
TSP_3
SoxY
DnaJ_C
Cadherin_5
DUF2606
Motif
Other DBs
NCBI-ProteinID:
VEI13118
UniProt:
A0A3S5EW14
LinkDB
All DBs
Position
1:complement(880962..885986)
Genome browser
AA seq
1674 aa
AA seq
DB search
MIAALALLFGGVLSGLFRTNTAQAAEPGFQTIDGQQVYQHPVDDQRFTFTPPDPIDGAIE
ATTTVAHKGSISGSVVFQRGGNIMVDHNTSNPRAIPMEGVRVYAQWMQAGDTKDKGAVSP
VYTTVTNSDGTFAIEMKDFTLPTGKVVKFDADPALPEGEKVKVWAVNPNDDKYTLLFSAG
NGAFYPNAVVADLTAGAEWSVANDSIAKFRIKYGEKIDNTVLHKTDDAGNILADANARDP
RLDGLGGGGYVKGRVAWNFTGSASAALWQTFADLSNSGDIPVPNINVYASYLSDYAVGKI
HNEYKSLIGKEIRGGGAPTTWSAEDEMKMQNWIKQQIAKEGKDKWIAETATAKTGADGHF
EIQFRGTYGENWDSCGTIASQVCRNLDLFGKVADDPQDGWWQKGDLLRPVKHVNLDWMFV
SHEPVPGAADTTQHHLNVWANTKIYAGSQVSSYAGWATGFNVTNSSADGYLWGLYPGELV
FDVFPYNVTDNPAHRGDTAKTTAYNVPTKFVENVRYEIEWESFGVDTETFKSVHKCSNIE
PTATGELPSCDYTVGDDVAEDTIFTAKLYSVDPDGKRSAQPLAADSFIVKFGWDPKYDDT
QAIAGVATSSAAPLFDDNSTVDIVEKVAAADLPVGKKVKPGSYVLASSFTTPADHVVNVD
PDTGVVTVTFPEGTPPGAELDVPVSVEFEDGSSSRGTAKFITVQADRDKYEPSYEGKEGK
PGETVTIDSPTFTDNEGNTATPANVTYGEQPGNPVPSGVTINPDGSITVEIPNGATNGQK
IDVPVRVTYEDGTPDDVTATVTVRTDDDGDGYLDPLDPANPQPGDDLCPDTPSGATVDSN
GCSVAPMVEQPGPITGTVGEPITEIVVKVDNPGLHTDLVCKAEGLPAGLDIVYDEAKGGC
VITGTPTAEVTDQPVKITVEHKAPETDNPNTDPVVTNTTATINPAKDDDGDGVPNHLDKC
PDTPSGATVDSNGCSVAPTVEQPGPITGTVGEPITEIVVKVDNPGLHTDLVCKAEGLPAG
LDIVYDEAKGGCVITGTPTAEVTDQPVKITVEHKAPETDNPNTDPVVTNTTATINPVGDD
DNDGVPNDKDLCPDTKPGETVNEEGCSLNDLNDPKYKPTNAVVGQATSSEAPTFDNPKTD
AVETNPAPAGTTFALGAGAPANATIDSATGIITMTPTIDQADQTFNIPVVVTYPNNGGVD
ETTAQFNVGDTQAATTTPKWDDSKTRPGVPVVIPNTGDDLPNGSVVTVEECPAGWTCTVQ
NGDELVVTPPADAPAGATVTVKVKVTYPDGSEDPEDVKVTVVANPNWDDTTTRPGKDVTI
PNTGGDVPADTEVTTDGPGTATLNPDGSITVTPNPDAEPGQQITVTIKDKDGRPIDEVTV
TIVENPNWDDQNTRPGKDVTIPNTGGDVPEGTEVTTEGPGEATLNPDGSITVTPKPEAKP
GDVIKVTITDKDGDPIDEFTVEIVPNPNWEDKETTPNKPIVIPNTGGDVPEGTEVTTEGP
GEGTLNPDGSITVTPGPDAKPGDVIKVTITDKDGDPIDEITVTIVPNPNWEDKETTPGKP
IDIPNTGGDVPEGSTVEVTGPGDATLKDDGTITVTPNPDAKPGDVIKVTVKDKDGNVIDE
FTVKIVEPDAPVVAKADPPAKKELSFTGASVLGTLGIAGLLTGVGALLVRRRNQ
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgcgctggcgttgttgttcggcggcgtgctgtcaggtctgttccgcacaaat
acggcgcaggcagcggaaccgggattccaaacgattgatggtcagcaggtgtatcagcac
cctgttgacgaccaaagattcacttttacgcctccagatccaattgatggcgcgatcgaa
gcgaccaccacggtggcgcataaggggtctattagcggatcggtagtgttccagcgcggt
ggaaacatcatggtggatcacaatacgagcaaccctcgtgcgatcccgatggagggagtg
cgtgtctacgcccagtggatgcaagctggcgataccaaggataagggtgcggtctctccg
gtttacacgaccgtgacgaactctgacggcacgtttgctatcgagatgaaggatttcacc
cttccgacaggtaaagtggtgaagttcgatgctgatccggctttgccagaaggcgaaaaa
gtcaaagtttgggcggtcaacccgaatgatgacaagtacaccctgctcttttctgcaggc
aacggcgctttctatccgaatgcggttgtcgctgatttgaccgctggcgcagagtggtca
gtggccaatgactcgattgccaagttccgaattaagtacggcgaaaagattgacaacact
gtcctacacaagacggacgacgccggaaacattcttgctgatgctaacgctcgtgatcca
agacttgacggtctcgggggcggtggctacgtgaagggccgagttgcatggaacttcacg
ggtagtgcgtctgctgctctctggcagacctttgcggatttgagtaacagcggcgacatc
ccggtgccgaatatcaatgtctacgcttcttacctttccgattatgcagttggcaagatt
cacaatgagtacaagagtctcattgggaaagaaatccgcggtggaggtgctccaacgacc
tggtctgcagaagatgaaatgaaaatgcagaactggatcaagcaacagatcgccaaggaa
ggcaaagacaagtggattgccgaaactgctacggcgaagaccggagcggacggacatttc
gagattcagttccgtggaacgtacggtgaaaattgggatagctgtggtaccatcgcatct
caagtctgtagaaacctagacctgtttgggaaggtcgctgacgatccgcaggacggttgg
tggcaaaaaggagacttgctgaggcctgtcaagcacgtcaatcttgactggatgttcgtc
tcccacgagcctgttccgggtgctgcagacaccacccagcatcacctgaatgtgtgggca
aacaccaagatttacgcaggaagccaggtctcgtcttacgctggctgggcaactggtttc
aatgtcacgaacagctccgcagatggctacctctggggcctttaccccggtgagcttgtc
ttcgatgtcttcccctacaatgtgacggataatccggcgcatcgtggcgatactgccaag
acaacggcgtacaacgttcccacgaagttcgtggagaacgtgcgttacgaaatcgaatgg
gagtctttcggagttgacaccgagactttcaagtctgttcacaagtgctcgaatattgag
cctactgctacaggtgagctccctagctgtgattacacggttggtgacgacgtcgctgaa
gatacaatcttcactgcgaagctctactcggtggatccggacggcaagcgctctgcgcag
ccgctcgctgccgatagcttcattgtgaagtttggatgggatccgaagtacgacgacacg
caggcgattgccggcgtcgcaacttcttcggctgctccgctgtttgatgacaactctacg
gtggacatcgtagagaaggttgctgctgcggacctcccggtcggcaagaaggttaagccg
ggctcctacgtacttgcctcctcgttcacaactcctgcggatcatgtcgtgaatgttgac
cctgatacgggtgttgtgaccgttaccttccctgagggaactcctcctggtgcggaactt
gatgttccggtcagtgttgaatttgaggacggttctagctctcgcggaactgcaaagttc
atcacggttcaggcagatagggataagtacgagccgtcctacgaaggtaaggaaggcaag
ccgggtgagaccgtcaccatcgactcgccgaccttcaccgacaacgaaggcaacactgcc
accccggccaacgtgacctacggcgagcagcctggcaatccggttccctccggcgtgacg
atcaaccccgatggttccatcaccgtggagattccgaatggtgccaccaacggccagaag
atcgacgttcccgtccgcgtgacctacgaggatggaacccccgacgatgtgaccgctacc
gttaccgttcgtacggacgacgacggcgacggctacctcgatccgctcgatcctgccaac
ccgcagcctggcgatgatctctgccccgacactccttctggtgcgacggtcgatagcaat
ggttgttctgttgctccgatggttgagcagcctggtccgattacgggtacggttggtgag
ccgatcactgagatcgtggtgaaggttgataatcctggtctgcatactgatctggtgtgt
aaggctgagggtctgcctgctggtcttgatatcgtttacgacgaggctaagggtggctgt
gttatcaccggtactccgactgcggaggttactgatcagcctgtgaagatcacggttgag
cacaaggctccggagacggataacccgaacaccgatccggttgtgacgaacacgacggcc
acgatcaacccggctaaggatgacgatggcgatggtgttccgaaccatcttgataagtgc
ccggatactccttctggtgcgacggtcgatagcaatggttgttctgttgctccgacggtt
gagcagcctggtccgattacgggtacggttggtgagccgatcactgagatcgtggtgaag
gttgataatcctggtctgcatactgatctggtgtgtaaggctgagggtctgcctgctggt
cttgatatcgtttacgacgaggctaagggtggctgtgttatcaccggtactccgactgcg
gaggttactgatcagcctgtgaagatcacggttgagcacaaggctccggagacggataac
ccgaacaccgatccggttgtgacgaacacgacggccacgatcaacccggttggtgacgac
gataacgacggcgtcccgaacgataaggatctgtgcccggacaccaagccgggtgaaacg
gtgaacgaagagggctgctccctcaacgatctgaacgatccgaagtacaagccgacgaac
gctgtggttggccaggcgacctcctctgaggctccgaccttcgacaacccgaagaccgac
gcagtcgagacgaaccctgcgcccgcaggcaccacgttcgcactcggcgctggcgctccg
gcaaacgcaacgatcgattcggctaccggtatcattacgatgacgccgacgatcgatcag
gccgaccagacgttcaacatcccggttgtggtgacctacccgaacaacggtggcgtcgat
gagacgaccgctcagttcaacgtgggtgatacgcaggctgctaccaccactccgaagtgg
gacgattccaagacccgcccgggcgtgccggttgttatcccgaacacgggtgacgacctg
ccgaacggctcggtagtaaccgttgaagagtgcccggccggatggacgtgcacggtgcag
aacggcgacgagctcgtcgtgacgcctcctgcggacgcccctgccggtgcaaccgttacg
gtcaaggtgaaggtgacctacccggatggttccgaagaccccgaagacgtgaaggtgaca
gtcgttgcgaacccgaactgggacgacacgaccacgcgtccgggcaaggacgtcacgatc
ccgaacacgggtggcgacgttccggcggacaccgaggttacgaccgacggcccgggtacg
gcaacgctgaacccggatggttcgatcacggtgacgccgaaccctgatgcggagccgggt
cagcagatcacggtgactatcaaggataaggacggacgtccgatcgacgaagtcacggta
accatcgtggagaacccgaactgggacgatcagaatactcgccccggtaaggacgtcacg
atcccgaacacgggtggcgacgtgcctgagggcaccgaggttacgaccgagggtccgggc
gaagctacgctcaacccggatggttcgatcacggtgaccccgaagccggaggcgaagcct
ggtgatgtcatcaaggtgaccatcacggataaggatggcgacccgatcgacgagttcacg
gtggagattgttccgaacccgaactgggaggacaaggagaccactccgaacaagccgatc
gtcattccgaacacgggtggcgacgttccggagggcaccgaggttacgaccgagggcccg
ggtgaaggtacgctcaacccggatggctcgatcacggtaacccctggtccggatgcgaag
cctggtgatgtcatcaaggtgaccatcacggataaggatggcgacccgatcgacgagatc
acggtgaccatcgttccgaacccgaactgggaggacaaggagaccactcctggcaagccg
atcgacatcccgaacacgggtggcgacgttccggaaggctccactgtcgaagtgactggc
ccaggcgatgcaacgctgaaggatgacggcaccatcacggtgaccccgaacccggatgcg
aagccaggcgatgtcatcaaggtgaccgtcaaggacaaggacggtaacgtgattgacgaa
ttcaccgtcaagatcgttgaaccggacgcccctgtggtcgccaaggctgacccgccggcc
aagaaggagctgtcgttcaccggtgcttcggtgctcggcacgctgggtatcgcaggtctg
ctcactggcgttggcgcgctcctcgtgcgtcgtcgcaaccagtaa
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