Trueperella bialowiezensis: NCTC13354_00854
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Entry
NCTC13354_00854 CDS
T05959
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tbw
Trueperella bialowiezensis
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbw03032
]
NCTC13354_00854 (topA)
03400 DNA repair and recombination proteins [BR:
tbw03400
]
NCTC13354_00854 (topA)
Enzymes [BR:
tbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC13354_00854 (topA)
DNA replication proteins [BR:
tbw03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13354_00854 (topA)
DNA repair and recombination proteins [BR:
tbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13354_00854 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
VEI13147
UniProt:
A0A3S4WG55
LinkDB
All DBs
Position
1:complement(915489..918176)
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AA seq
895 aa
AA seq
DB search
MTKLVIVESPAKARTIGNYLGPEYEVEASIGHIRDLPRPSELPAEMKKGPYGKFAVDVDN
DFEPYYVVSPDKKKKVSELRAKLKDADELYLATDEDREGEAIAWHLLEALKPKIPVKRMV
FHEITKEAIERALENTRDIDTELVDAQETRRILDRLVGYEVSPLLWRKVAPSLSAGRVQS
VTTRLVVERERERMAFVPASYWDVTVRHAKASESFESKLHSLDGARIASGKDFNDDGELK
PKPVRDGVRALGQEDAEAIAKVLEGAESSVASVETKPYRRRPAAPFTTSTLQQEASRKLR
MSSRDTMSIAQALYENGYITYMRTDSTNLSGEAIAAARKQIKELYGAASLPDKPRVYASK
AKGAQEAHEAIRPAGDSFRTPQEVASELRGREYALYELIWKRTVASQMADATGSTASVRL
IADLGGAAGAQEATLAASGTIITFRGFLAAYEEGEDKKRYEDKSDSRLPDLHEGEVVANE
EATADGHETTPPPRYTEASLVRELEEKGIGRPSTYASTISTIIDRGYVYKKGQALVPTWL
AFSVVRLLEENLPNLVDYDFTADMEAELDDIAAGEKGRVEYLERFYKGGDGVEGLHEQVE
GLGDIDARAVNTIELSDRIAVRVGRYGPYLEETNEAGEVARRANIPDDVAPDELTVDKAK
ELLDAALQGDRELGKDPETGYTIVVKDGRFGPYVSEVLPDDAVAYTPTGKVSKVKPKPKT
ASLFASMSPDTVTLEEALKLLALPREVGESQGEMIIATNGRYGPYMKRGKESRSLETEEQ
IFEITLEEAEAIFAQPKKRGRAAARPPLAELGKDPVSGGTILLKDGRFGPYVTDGIVNAS
VPRSDDINQITPERAQDLLVQRRLKIAEQGGPKARNKTKNTVRAKGRGRGSKAKK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctggtcatcgtcgagtcgccggcgaaagcgcgtacgatcgggaactatttg
gggcccgagtacgaggttgaggcgtccatcgggcatatccgcgatttgccgcgcccgtcc
gaactgcctgcggagatgaagaagggcccgtatggcaagtttgcggtggacgtggataac
gatttcgaaccgtactatgtggtgagtcctgataaaaagaagaaggtctcggagctgcgt
gccaagctcaaggatgccgacgaactctacctcgcaaccgatgaggatcgcgagggtgag
gcgattgcgtggcatttgctggaggcgctcaagccgaagattccggtcaagcgcatggtt
ttccacgagatcacgaaggaagcgattgagcgcgcgctagaaaatacgcgtgacatcgac
acggagttggtggacgctcaggagacccgtcggattttggacaggctggtcggctacgag
gtctcgccgttgctgtggcggaaggtggcgccgtcgctgtcggcggggcgcgtgcagtcg
gtgaccactcggctcgtcgtggagcgtgagcgggagcgcatggcgttcgtgccggcgtcg
tattgggatgtgacggtgcgccacgcgaaggcgagcgagagcttcgagtcgaagttacat
tcgctggatggcgcgcggatcgcgtcgggtaaggattttaacgacgacggcgagctgaag
ccgaagccggtacgcgacggcgtgcgtgcgctcggccaggaggacgcggaagcgatcgcg
aaggtgcttgagggtgcggaatcgtcggtggcgtcggtggagacgaagccgtatcggcgt
cggccggcggcgccgtttacgacgtcgaccctccagcaggaggcctcccggaagttgcgg
atgagttcgcgtgacacgatgagcatcgctcaggcgctgtacgaaaacgggtatatcacg
tatatgcgtacggattcgacgaacctgtccggtgaggcgatcgcggcggcacgcaagcag
atcaaggagctgtacggggcggcgagtttgccggacaagccgcgggtgtacgcgtcgaaa
gcgaagggcgcgcaggaagctcacgaggcgatccgcccggcgggtgattcgttccgcacg
ccgcaggaggtggccagcgagctgcgcgggcgcgaatacgcgctctatgagctgatttgg
aagcgcacggtggcgtcgcagatggcggacgcgacagggtcgacggcgtcggtgcggctt
atcgccgatctcggcggagctgcgggtgcgcaggaagccacgctggcggcgtcgggaacc
atcatcaccttccgcgggttcctggccgcctacgaggagggcgaggacaagaagcgttac
gaggacaagtcggattcgcggctgccggacctgcacgagggtgaggtcgtggcgaacgag
gaggccacggcggacgggcatgagacgacgccgccgccgcgctacaccgaggcgtcgctg
gtgcgcgagctggaggagaaggggatcggccggccgtccacgtacgcctccacgatttcc
acgatcatcgaccgcggatacgtgtataagaaggggcaggcgctcgtgcccacgtggctc
gcgttttcggtggtgcggctgctcgaggagaacctgccgaacctggtcgactacgatttc
acggccgacatggaggccgagcttgacgacatcgccgctggtgagaaggggcgcgtggag
tacctggagcggttctataagggcggcgacggcgtggagggcttgcacgagcaggtcgaa
ggtctgggtgacatcgacgcgcgtgcggtgaacacgatcgagctgtcggaccggattgcg
gtgcgcgtggggcgctatggcccgtatcttgaggagacgaacgaggccggcgaggtggcg
cgcagggcgaatattcccgacgacgtcgcccccgacgagctgaccgtcgacaaggcgaaa
gaactgctcgacgcggcactgcaaggggatcgcgagctgggtaaggatccggagacgggg
tacacgatcgtcgtcaaggacgggcggttcggcccgtacgtgtccgaggtgttgcccgac
gacgccgtcgcctacacgcccacgggcaaggtctcgaaggtcaagccgaagccgaagacg
gcctcgctgttcgcgtcgatgagcccggacacggtgacgctcgaggaagcgttgaaactg
ttggcgttgccgcgcgaggtgggagagagccagggcgagatgattatcgcgacgaacgga
cgctacggcccgtatatgaagcgcggtaaggaatcgcggtcgctggagaccgaggagcag
attttcgagatcacgctcgaggaggcggaggccatttttgcgcagccgaagaagcggggg
cgggcggcggcgcgtccgccgttggcggagctgggtaaggacccggtctcgggtggcacg
atcctgctcaaagacggccggtttgggccgtatgtgacggacgggatcgtgaatgcgtcc
gtgccgcgctcggacgacatcaaccagatcacgcccgagcgggcgcaggacctgctggtg
cagcgccggttgaagatcgccgagcagggcgggccgaaggcgcgcaacaagacgaagaat
accgtgcgcgcgaagggacgcgggcgcgggagtaaggcgaagaagtga
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