Trueperella bialowiezensis: NCTC13354_01061
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Entry
NCTC13354_01061 CDS
T05959
Symbol
recF
Name
(GenBank) DNA replication and repair protein recF
KO
K03629
DNA replication and repair protein RecF
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13354_01061 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbw03400
]
NCTC13354_01061 (recF)
DNA repair and recombination proteins [BR:
tbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC13354_01061 (recF)
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Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
VEI13349
UniProt:
A0A448PEI3
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Position
1:1119176..1120372
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AA seq
398 aa
AA seq
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MLEFSPGVVTFIGENGQGKTNLVEAIGYLATFSSHRVAADAALVRQGANAGVIRAKVNRG
SSDTMVELEILTGKANRARINRGNARPADLLGIVRAVTFAPEDLELVKGDPAARRRFLDD
LMVQFRPRLGAVRAEYDKVLRQRGALLKTMAKAKRRGGYYDEAALDVWDAQLIRFGSQII
AARAEIVAGLRPFVEEYYTAVSAGRGLARIDYAANLDVRRGWDLPEPHELNSDDAEVRQS
ARDKVAAHERDAQDVEATARLFGETLQQWRADEIDRGVNLVGPHRDDLALSLGTLPAKGF
ASHGESWSYALALRLGSWKLLRSHSSGDWADNEEPILILDDVFAELDSRRREQLARIVTE
AEQVFVTAAVGEDLPELGGTRFVVHDGTVQHVEEPGDD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgagttttcgcccggagttgtcacctttataggggaaaacgggcaggggaagacg
aacctcgtggaggcgatcggctaccttgccacgttttcgtcccacagggtggcagccgac
gccgctttggtacggcagggcgcaaacgccggtgttatcagggcgaaagtgaaccgtggc
agctcggacacaatggtcgaactggaaatcctgacaggcaaagccaaccgtgctcggatt
aaccggggtaatgcgaggcctgctgacctgctaggaatcgtccgcgctgtcacgtttgct
cccgaggatctcgaactcgtgaaaggagaccccgcggcacggcgtcgttttcttgatgac
ctcatggtgcagttccgcccgcgtcttggagcagtccgcgccgaatatgacaaggtgtta
cgtcagcgcggagcgttgttgaagacgatggcgaaagccaagcgccgcggcggatactat
gacgaagctgcacttgacgtgtgggatgctcagctgatccggttcgggtcgcaaattatt
gcggcccgcgcggagattgtggcgggtttgcgccccttcgttgaggagtattacacggct
gtatccgcggggcggggtctggcccggatcgactacgctgccaaccttgacgttcgccgc
ggctgggatctgcccgaacctcatgagctcaatagcgacgacgccgaggttcggcaaagc
gcccgcgacaaggtagcagcccacgaacgagacgcgcaagacgtcgaggcgactgcccgt
ttgtttggcgaaacgttgcagcagtggcgcgcagatgagatcgaccgcggcgtgaacttg
gttggtccgcaccgcgatgatcttgcgctgagcctgggaaccctgcccgcaaaaggtttc
gcgtcccatggcgaatcgtggtcgtatgcgctcgcgttgcggctcggctcatggaagttg
ttgcgtagccattcgtcgggtgattgggcagacaacgaagagccgattttgattctcgac
gacgtgttcgcggaactcgactcccggcgtcgggaacaactcgctcgtatcgtcacggag
gccgagcaggtattcgtgaccgccgcggtcggcgaagacctaccagaattgggcggcaca
agatttgttgtccatgacggaaccgtgcaacacgtggaagagcctggcgatgactag
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