Trueperella bialowiezensis: NCTC13354_01514
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Entry
NCTC13354_01514 CDS
T05959
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw03420
Nucleotide excision repair
tbw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13354_01514 (pcrA_2)
03430 Mismatch repair
NCTC13354_01514 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbw03400
]
NCTC13354_01514 (pcrA_2)
Enzymes [BR:
tbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13354_01514 (pcrA_2)
DNA repair and recombination proteins [BR:
tbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13354_01514 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC13354_01514 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
VEI13792
UniProt:
A0A3S4VBF4
LinkDB
All DBs
Position
1:1651815..1653824
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AA seq
669 aa
AA seq
DB search
MTDNFDDADALLEHLDARQREVAENVHGPMAVLAGAGTGKTRAITYRIAYAIRSGAHDPR
NILAVTFTAKAASEMRSRLRDLGVGNVQARTFHSAALSQLRYFWPNAIGGYVPEIRESKM
PLVSQAAASLGMDVDRVTVRDLASEIEWSKVSLIAPDDYVERAEAVNRALIGEYPHAQIA
NLIKAYEEVKTERAVIDFEDVILILIGIMVDRPDIAKRIREQYRHFVVDEYQDVSPMQHR
LLQLWLGDRRDLCVVGDVSQTIYSFTGASAGYLENFTKEFPRARTVKLNRDYRSTPQIVE
LANQMIEPIRSPASVELVSAMKSGRPVEYTEYTDDADEAANIAGKILSLREAGVPLSEIG
VLYRINAQSLEFETALAQAGIPFEVKGSQRFFERKEVREAMVALRAVARGPQRDDLPVMV
EDTLRTLGWRPEAPQAGAAKERWEAQRAILNLAEEKWQARQATLPEFVAELEERAESGND
PVTNAVTLSSLHGAKGLEWTAVFLAGMSEGLMPISHAKTSEQIAEERRLLYVGVTRAREE
LFISYATGNTGRANRKLSRFVEPHWPQPVSRSTRARRRSKDAKENWAKENPADVPLFEEL
RAWRLEMTRRTGRPAHTILHDVTLREIAETKPRDLAELGRVRGIGTRKLTDYGLDILDIV
NGKPLGSGK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaactttgacgacgccgacgccctgctcgaacatctcgacgcccgccaacgg
gaagtggccgaaaacgtccacggccccatggccgtcctcgccggtgccggcacgggcaag
acgcgggcgatcacctaccgcatcgcctacgccatacgctccggcgcacatgatccgcgc
aacatcctcgccgtcacgttcactgcgaaggcggcaagcgagatgcgctcgcggttacgt
gacctgggcgtgggtaacgtgcaggcgcgcacgttccactccgccgcgctcagccagttg
cggtacttttggccgaacgcgatcggcggatacgtgccggagattcgcgagtcgaaaatg
ccgctcgtgtcccaggctgcggccagtttgggaatggacgtggaccgggtgactgtacgc
gatctggcctcggagattgaatggtcgaaagtttcgcttatcgcgccggatgattatgtt
gagcgtgccgaagcagtcaatagggcgctgatcggcgagtatccccacgctcaaattgcg
aacctgatcaaggcgtatgaagaggtgaaaacagaacgggccgtcatcgattttgaggac
gtcatcctcatcctcattggcatcatggtggaccggccggatattgcgaagcggatccgt
gaacagtaccggcatttcgtcgtcgacgaatatcaggacgtctcgcccatgcaacaccgg
cttttacagctgtggctgggtgatcgacgagatttgtgcgtggtgggagacgtctcacag
acgatctactcgtttaccggggcgtccgccggatatttggagaatttcacgaaggagttc
ccgcgggctcgcacggtcaagttgaatcgcgactatcgttccacccctcagattgttgag
ctagcgaaccagatgattgagccgatccgctcgccggcgtcggtagagctggtctcggca
atgaaatcgggcaggccggttgagtacacggaatataccgacgacgccgatgaagcggcc
aacatcgccggcaagattctctcattgcgcgaggccggggtaccgctgtcggagatcggg
gtgctctaccggattaacgcccagtcgctcgagtttgaaacggcccttgcgcaggcgggg
ataccttttgaggtcaaaggttcgcagcgattttttgagcgcaaggaagtgcgtgaagca
atggtggctttgcgtgcggtggcacgcggcccgcagcgtgacgacctgcccgtcatggta
gaagacacgctgcgcacgctcggctggcgtccggaagctccgcaggctggcgccgcgaag
gagcgctgggaggcacagcgggcgatcttgaaccttgcagaagaaaagtggcaggcccgg
caggccacgctgcccgagtttgtggcagaactggaagagcgcgcagaatcgggcaacgat
ccggtgaccaacgccgtcaccctctcgtccctacacggagcaaagggcttagaatggacg
gccgtgtttttagcgggaatgagcgaagggctcatgccgatctcgcatgcgaaaacgagc
gagcagatagctgaagaacgccggctactctacgtgggtgtcacccgggcacgcgaggaa
ctgttcatttcctacgccacgggcaacaccggtagagcgaatcgtaagctcagccggttt
gtggaaccgcattggccgcaacccgtctcgcgcagtacccgggcgcgcaggcgctcgaag
gatgcgaaagaaaactgggcgaaagaaaacccggcggacgtgcccctgttcgaagaacta
cgcgcctggcgccttgagatgaccaggcgtacgggccggccggcgcacaccattttacac
gacgtcacgctacgtgaaatcgccgaaaccaagccacgcgacttggcagaacttggccga
gtgcgcgggattggcacccgtaaactcaccgactacgggcttgacatcctcgacatcgtc
aacggcaaaccactcggctctggcaagtag
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