Trueperella bialowiezensis: NCTC13354_01776
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Entry
NCTC13354_01776 CDS
T05959
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tbw
Trueperella bialowiezensis
Pathway
tbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13354_01776 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbw03019
]
NCTC13354_01776 (rng)
03009 Ribosome biogenesis [BR:
tbw03009
]
NCTC13354_01776 (rng)
Enzymes [BR:
tbw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NCTC13354_01776 (rng)
Messenger RNA biogenesis [BR:
tbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC13354_01776 (rng)
Ribosome biogenesis [BR:
tbw03009
]
Prokaryotic type
rRNA processing factors
NCTC13354_01776 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
DUF7326
RasGAP
Motif
Other DBs
NCBI-ProteinID:
VEI14045
UniProt:
A0A448PGI0
LinkDB
All DBs
Position
1:1929924..1932161
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AA seq
745 aa
AA seq
DB search
MSRAVKARRKRREDNADEPDSERESGSGGDSTDGDDSSPRKRRRGKRGGRKSSESAHKTE
QDSDDSSDEESGTSSRKVTKTRRTRQRKSSSKETRESADSKAEESEESDKANGQGETTVR
RRRRRRSSDDDGVTAPKGSTRLEAKRRRRKESRRASRRRTTITESEYLARREAVDRVMLV
REQDGLNQIAVLEDDVLVEHYVARHTQTSMVGNVYLGRVQNVLPSMEAAFVDIGKGRNAV
LYAGEVNWDSVGMSGKTHKIEDALKSGDPVLVQVTKDPIGHKGARLTGQVTLAGRHLVLV
PGGSMMGISRKLPDTERSRLKSILKKVVPGEHGVIVRTAAEGATEEQLQGDVDRLAKSWK
EIQAKSKSSKNAPSLLKAEPELAVRVVRDIFNEDFKKLKVSGDEAWKTISQYVEDLSPDL
VDRLEHWESDKDIFAENRVDEQLAKAFDRKVFLPSGGSLIIERTEAMTVIDVNTGKFTGS
GGTLEETVTRNNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLEENRDLVLRRLIECLGRDR
TRHQVAEVTSLGLVQMTRKRVGQGLVEAFSTTCECCDGHGYITHENPVERGETDEQNPRT
STRRQARERPRKKAAADPKHEEVRAALANIAAAASSKNDATDKKEAAGKSEAADKKEAAD
GRERASAQEKKPVRRSKSKKAAPTKAESGAKPEGNGEAESSAKADGNSEGEAKPKRERRR
VTSSGTISTGSSGKSHIMSFPVKKD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcggttaaagcccgccgtaagcgccgtgaggataacgctgacgagcctgac
agcgagcgcgaatctggcagcggcggcgattctaccgacggcgacgactcctcgcctcgc
aagcgccgccggggtaagcgcggcggacgtaagagcagcgagtcagctcacaagaccgag
caagattccgatgactcctccgatgaagaatcgggcacgtcgtcgcgcaaagtaaccaag
acacgccgcacacgtcagcgtaaatcctccagtaaagaaacacgcgagtcggctgacagt
aaagcagaggaatccgaagaatccgataaggcgaacggccagggcgagacgaccgtacgg
cgtcggcgtcggcgtagatcttccgacgacgacggcgtcaccgcacccaaaggctccacg
cgcctcgaagcaaagagaaggcgtaggaaagaaagccggcgcgcctctcggcgtcgtacc
acgatcaccgaatcggaatacctggcgcgcagggaagccgttgatcgagtcatgctggta
cgcgaacaggacggcctcaaccagatcgccgtgctggaagacgacgtgctcgtcgaacac
tacgtggcacgccacacccaaacctcgatggtcggtaacgtttaccttggccgcgtccaa
aacgtgctgccgtcaatggaagccgcgttcgttgacatcggcaaggggcgaaacgccgtc
ctgtacgccggcgaagtcaactgggattcggttggaatgagcggcaaaacccacaagatt
gaagacgccctgaaatcgggcgatccggttctcgtgcaggtcacgaaagacccgatcggc
cacaagggcgcccggctaaccggccaggtcaccctcgcaggccgccaccttgtacttgtg
cccggcggctcaatgatgggtatttcccgcaagttgccagacaccgagcgctcgcggctg
aagtcgatcttgaagaaggttgtgcccggtgaacatggcgtcattgtgcggacggctgcc
gaaggtgccaccgaagaacaactccaaggtgacgtcgatcggctcgccaagtcttggaaa
gagatccaggccaaatcaaagtcgtcgaagaacgcgccctcgctgcttaaggctgaaccg
gagctggccgtgcgtgtggttcgtgacatcttcaacgaagacttcaagaagctcaaggtt
tctggtgacgaggcgtggaagacgatcagccaatacgttgaggacctctcgccggacctg
gttgatcgtttggagcactgggaatcggacaaggacatctttgcggagaaccgggttgac
gagcagcttgcgaaagcgttcgaccgcaaggtattcctgccgtcgggtggatcgctcatc
attgagcgcaccgaggcgatgactgtgatcgacgtcaacacaggcaagttcaccggttcg
ggcggaaccctcgaagagaccgtgacccgcaacaacctggaagctgccgaagaagtggtc
cgccagctacgcctgcgcgacatcggtggcatcatcgtcatcgattttattgacatggtg
ctcgaagaaaaccgtgacctcgtgcttcgccggctcattgaatgcctcgggcgggatcgc
actcgccaccaagtagccgaagtgacctccctcgggctcgtgcaaatgacccgcaagcgg
gttgggcaagggctcgttgaagcgttttctaccacgtgtgagtgctgcgacggccacggc
tacattacgcatgaaaaccctgtggaacgcggcgaaactgacgaacaaaatccgcgcaca
tccacccgccgccaggcccgtgaacgtccgcgcaagaaggctgcggccgatccgaaacat
gaggaagtgcgtgcagctctggctaacattgctgcggctgcatcgtccaagaacgacgcc
acggataagaaagaggccgcgggtaagagcgaggccgcggacaagaaagaggccgctgat
gggcgggagcgggcttcggcacaggagaagaagccggttcgccgtagcaagtcgaagaag
gccgcgcccaccaaggcagaaagcggcgccaagccagaaggcaatggcgaagccgaaagc
agcgccaaggctgacggtaattctgagggcgaggccaagccgaagcgtgagcgccgccgg
gtgacgtcgtcgggaacgatcagcaccggaagttccggcaagtcgcacatcatgagcttc
cccgtgaagaaagattag
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