Tenericutes bacterium MZ-XQ: BK011_00285
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Entry
BK011_00285 CDS
T05490
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
tbz
Tenericutes bacterium MZ-XQ
Pathway
tbz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BK011_00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbz03400
]
BK011_00285
DNA repair and recombination proteins [BR:
tbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BK011_00285
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BK011_00285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
nSTAND1
AAA_29
AAA_16
AAA_21
nSTAND3
DnaJ_CXXCXGXG
AAA_22
ATPase
AAA_23
cobW
BCA_ABC_TP_C
Viral_helicase1
NACHT
Motif
Other DBs
NCBI-ProteinID:
AUD64205
LinkDB
All DBs
Position
61886..64699
Genome browser
AA seq
937 aa
AA seq
DB search
MDDKIRVFGARENNLQNIDIEIPKNKLVVMTGISGSGKSSLAFDTLYQEGQRRYMESLSA
YARQFLGNFEKPDVDRIDGLSPSISIDQKTTSNNPRSTVGTVTEIYDYLRLLYARIGIPY
CPGSNEPLTKQTIEEMTKRVISFKEGSKIIVMSPVIERQKGTLKKTAEQYLKEGFTRAYI
DGETHLLEEFPDLDKNKNHDFYLVIDRLIVKDGIRSRLYDALELAARLASGKTKVLVDND
AMVSFSQNYSCEDSDFTIPDLEPRLFSFNVPIGACPSCNGLGYRLEITEELVLDPEKPLL
EGGLVPYKNNDGENLTSQMIEEVCKAYKIDLNKPVKELSREHLDIVLYGSPDPLHFKLKS
SSGRKHETNDYYEGMITNLSRRYRETTSDWIRTWIENFMVESECHTCYGARLNPSALSVK
VGGLNIDEFTRLSIDDEIKFLTDLELGIEEKQIARLALQEIINRLTFLQDVGLGYLTLHR
QAGTLSGGEAQRIRLATQIGSKLSGVLYVLDEPSIGLHQRDNQRLIDTLHKMRDLGNTLV
VVEHDHETMLASDYLIDIGPRAGKAGGRVVAAGTPEEVMNHKDSITGKYLRGELEVETPK
KRRKGLGKDIMVMGAKANNLKDITVSFPLGKLTVVTGVSGSGKSSLVNEVLLKGMQQKYY
KSKDKPGEHTAINDHQLIDRVIEISQSPIGRTPRSNPATYTGVFDDIRDLFSKTNEAKAR
GYSKSRFSFNVKGGRCEACGGDGVKKISMHFLPDVYVPCEVCEGLRYNHETLQIKYKGSH
IADVLDMTIDDAMDFFENHPKIYQKLKIIHDVGLGYIQLGQSATTLSGGEAQRVKLASEL
YRRITERSIYILDEPTTGLHTDDVGRLLQVLHRIVDEKATMVVIEHNLDVIKNADHIIDL
GPEGGELGGYIVAQGTPEQIAKVNESYTGQYLKKVLK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggatgataaaatcagagtatttggtgcaagagaaaacaatttgcaaaatatagatatc
gaaattcctaaaaataaacttgtcgtcatgacaggtatttctggtagtggtaaatcatca
ctagcttttgatacgttatatcaagaaggacaacgtagatatatggaaagtttgtctgca
tatgcaagacagtttttagggaattttgaaaaaccagatgttgatcgtatcgatggtctt
tcaccatcgattagtattgatcaaaaaacaacatcaaacaatccgagatcaacagtagga
actgttactgaaatctatgattatttaagattattgtatgcacgtatcgggattccttat
tgccctggctcaaatgaacctttaactaaacaaaccattgaagagatgacaaaaagagtg
attagttttaaagaaggtagcaaaatcattgtcatgtccccagtcattgaaagacaaaaa
ggaacgcttaagaaaactgcggagcagtatttaaaagaagggttcacaagagcatacatt
gatggagaaacacatcttttagaagagttcccagatttagataaaaataagaatcatgat
ttttatttagtgattgatcgtctcattgttaaagatggaattcgttctagattatatgat
gctttagagttagctgcaagacttgcgagtggtaagacaaaagttttggtggataatgat
gcaatggtatcatttagtcaaaattatagttgcgaagattcggatttcacaataccagat
ttagaacctagacttttttcatttaacgtacctatcggagcttgtccatcatgtaatggt
ttggggtatcgattagaaattacagaagagttggttttagatcctgaaaaaccattgtta
gaaggcggacttgttccatataaaaataacgatggtgaaaatttaacttcacaaatgatc
gaagaggtatgtaaagcctataaaatcgatttaaataaacctgtaaaagaattatctaga
gaacatttagatattgttttatatggttcacctgatccacttcatttcaaattaaaatca
tcatcaggaagaaaacatgaaacaaacgattattatgaaggtatgattacaaacttatcc
agaagatatagagaaacaacgagtgactggattagaacttggattgaaaacttcatggtc
gaatctgaatgccatacatgttatggcgcaagacttaatccgagtgctctatcagttaaa
gtcggaggattaaacattgatgagttcactagattatcaattgatgatgaaattaagttc
ttaacagatttagagttaggtattgaagaaaaacaaatcgcaagacttgcgcttcaagaa
atcatcaacagactaacattcttgcaagatgtaggattaggttatttaactttacataga
caagctggaactttatctggtggtgaagcacaaagaattagacttgctacacaaattgga
tcaaaactttctggtgtgttatatgtattagatgaaccttccattggtctgcatcaaaga
gataatcaaagacttattgatacacttcataagatgagagatttaggtaatactttagtt
gttgttgagcatgatcacgaaacaatgcttgcaagtgattatttaattgatattggtcca
agagcaggtaaagctggtggacgagtggttgctgctggaacaccagaagaagtcatgaac
cataaagacagtattacaggtaaatacttaagaggtgaacttgaagttgaaacacctaaa
aagcgaagaaaaggtttagggaaagacattatggttatgggcgcaaaagccaataactta
aaagatattactgtatcttttccgctaggtaagttaacggttgtaacgggtgtatccgga
agtggtaaatcttcattagttaatgaagttttactcaaagggatgcaacaaaaatattac
aaatctaaagataagccaggagaacatacagcaattaatgatcatcaactcattgatcgt
gtcattgaaatttcacaatcaccgatcggtagaacaccacgatcaaatcctgcaacatac
acaggtgtatttgatgacatcagagatttgttttcgaaaacgaatgaagcgaaagctaga
ggttattcaaaatcaagattctcattcaacgtcaaaggtggacgttgtgaagcatgtggt
ggtgatggagttaaaaagatttcaatgcactttttgccagatgtttatgttccttgtgaa
gtttgtgaaggattaagatataaccatgaaactctgcaaatcaaatacaaaggcagtcac
attgcggatgttttagatatgacgattgatgatgcgatggatttctttgaaaaccatcca
aaaatatatcaaaaacttaaaatcattcatgatgttgggttgggttacattcaacttggg
caatcggctaccactttatctggtggtgaagctcaaagagttaaactagcaagtgagctt
tatagaagaatcactgaaagatccatctatattttagatgaaccaacaacaggactacat
actgatgatgtcggacgattacttcaagtgttacatagaattgttgatgagaaagcaact
atggttgttattgaacataatttagatgtcatcaaaaatgccgaccatatcattgactta
ggaccggaaggtggagaattgggcggatatatcgttgctcaagggacacctgaacaaata
gctaaagttaacgaaagctatacaggacaatatttaaaaaaggttttaaaatag
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