Tenericutes bacterium MZ-XQ: BK011_03750
Help
Entry
BK011_03750 CDS
T05490
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tbz
Tenericutes bacterium MZ-XQ
Pathway
tbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BK011_03750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbz03019
]
BK011_03750
03009 Ribosome biogenesis [BR:
tbz03009
]
BK011_03750
Enzymes [BR:
tbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BK011_03750
Messenger RNA biogenesis [BR:
tbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BK011_03750
Ribosome biogenesis [BR:
tbz03009
]
Prokaryotic type
rRNA helicases
BK011_03750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
RMI1_N_C
Motif
Other DBs
NCBI-ProteinID:
AUD64829
LinkDB
All DBs
Position
complement(755850..757535)
Genome browser
AA seq
561 aa
AA seq
DB search
MNKLFNELPILNETKEAIKALGLVETTDIQHHTIDHLLEKKDLIGQAQTGTGKTFAFAIP
MIEHIDPKSNVIQGLVICPTRELTLQVYKEFVKLVKFNKDIRITSIYGGESYQKQFKALQ
NHPHIVVATPGRAIDHLERKTMDLSHLEMLVMDEADEMLKMGFQEDLEKLLKDTPQDRQT
ALFSATMPDFIKKVAQKYQRNPEIVVIKTKALTVDKIDQYYYMIKKSDRDQLLLRVLDFF
HPTSAIIFANTKKDVDHVAAYLQKFNYEADALHGDLKQNQRDYVMNKFRSRKLTLLVATD
VAARGLDVSHVDVVINYELPFEDEVYVHRIGRTGRAGESGMSVSFVYPSMRGKLMLIEKF
IKSKMQELEIPTILEITQKQDDKLFDDIKHYIDVKEKNYTELIDRLIKTGYDVDDIISAL
IEKLSVKIKPYEDISKPRTKQDSFSQISSRGDRQGRRSDRSGRSGDRSQRSSDRSNGPRN
SGPSNLVLVDMNIGKQDGLRAPHLLDYFKKNADMYPKNIGDINIHDNHTTFEINAKAVKR
LDQLNNKIFKGRQLKFKITKK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattatttaacgaattaccaattttaaatgaaacaaaagaagcgatcaaagcg
ctaggtttagttgaaacgacagacattcaacatcatactatagatcatctattagagaaa
aaagatttaattggacaagcacaaacaggaacaggaaaaacatttgcgtttgccattcca
atgattgagcatatcgatccaaaatcaaatgtgattcaaggattagttatctgtccaaca
agagaattaactttacaagtttataaagagtttgtaaagttagtaaaatttaataaagat
atcagaataacatccatttatggtggcgagtcttatcaaaagcagtttaaagcactacaa
aatcatccacatatcgtagtagcaactcctggtagagcaatcgatcacttagagagaaaa
acgatggatttatctcatcttgagatgcttgtcatggatgaagctgatgaaatgctaaag
atgggttttcaagaagaccttgaaaaactattaaaagatacaccacaagatagacaaaca
gcattgttttcagcaactatgccagattttattaaaaaagttgcacaaaagtatcaaaga
aatcctgaaatagttgtgattaaaacaaaggcacttactgttgataaaattgatcaatac
tactatatgataaaaaaatcagatcgtgatcagttattacttagagtcttagactttttc
catccgacttcagcgattatttttgcaaacacgaaaaaagatgtcgatcatgttgcagca
tatttacaaaaatttaattatgaagcagatgcacttcacggcgatttaaaacaaaatcaa
agagattacgtcatgaacaaatttagatcacgtaaacttacattgttggttgcgaccgat
gttgctgcgcgtggacttgacgtatcccatgttgatgtagttattaactatgagttacca
tttgaagatgaagtttacgtacatcgtataggacgtacaggtagagctggtgaatcagga
atgtcagtctcatttgtttatccttcaatgagaggtaaactcatgttgattgaaaaattc
atcaagagtaagatgcaagaactagaaataccaactattttagaaatcacacaaaaacaa
gatgataaactttttgatgacattaagcattatattgatgtcaaagaaaagaattataca
gaactcattgacaggttaatcaaaacaggttatgatgtcgatgatatcatatctgcactc
attgaaaaactatcagttaaaattaagccttatgaagatatatcaaaaccaagaacaaaa
caagattcatttagtcaaatctcatcaagaggagatagacaaggtagaagaagtgatcgt
tctggaagaagtggtgatcgatctcaaagaagcagtgatcgttcaaatggccctagaaat
agtgggccaagtaatcttgttttagttgatatgaatattggtaaacaagatgggctaaga
gcaccacatttacttgattattttaagaaaaatgctgacatgtatccaaaaaatattgga
gacatcaacatccatgataatcatacaacttttgaaatcaacgcaaaagctgtaaaaagg
cttgaccaactgaacaataaaatattcaaagggcgtcaattaaagtttaagatcacaaag
aaataa
DBGET
integrated database retrieval system
