KEGG   Tribolium castaneum (red flour beetle): 100141744
Entry
100141744         CDS       T01046                                 
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
tca  Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:tca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    100141744
   03041 Spliceosome [BR:tca03041]
    100141744
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100141744
   mRNA cycle factors
    P-body specific factors
     100141744
Spliceosome [BR:tca03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    100141744
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WD40 Beta-prop_EML_2 Beta-prop_RIG_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_TEP1_C PEP5_VPS11_N Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_pof12 Tricorn_2nd RNAseD_HRDC_C Rrn6_HB
Other DBs
NCBI-GeneID: 100141744
NCBI-ProteinID: XP_001815774
UniProt: D1ZZV0
LinkDB
Position
LG4:5068805..5073478
AA seq 1213 aa
MNELAVPPAPLWYRSSVLACAPDNTLVYGAKSDIVIVREKGPEEPAEVKLIHSAHSKLLT
SVSLNRRWKEPHSYVVSLGEDSVMKVWDLDTFEKKTSNRDHVEHKNPVIGAVFAGDDRVV
SASSTGFVHVWNINTNESKPLVDLFKSKVTLTCLSSCPHAGWLMAFGLNNGVVIVADLRR
NGQVLYKLRGHYQAVVCLSWCPAPVNIFPRHGQNTVKNKSSESEHNEGSSSDKTVETKEK
VNPWVNLVHADDGEASSGKETLSDTISDFLKDCHLLKSKILGLEPELVKSAEVKNSAADN
EAESEVECEREFVPEVDCGRPLPKLYDPSGDFLDDSVLDSEIIEDKDEGNEKDIEHTGSE
VKTDQTDETREKFDSPEKSECDSVLESETEKHDNTPEESPKIATPEESPKVVEPIEEEPR
AEYLLASCGKDKSVYIWRAGTDGRMQTFFQAAKKGNNRRKNESTWMSLCWIAPDLLLTSS
TKDELLAWPLPKPKTPKQYRVVHLEHSSLIFNIVAPPKYTTAFNWREKHELSAWTWSQDG
NLVCFDLDAEKTRMCFSCITAFITCCDTSPLDPNRLAIGLKDGGIKIWDLSLPHTKTITM
QKYHPKYTHKVTTIAWHPTREMFLGFGTEEGRVGSIDLISKKTTLFSHYFHSQVYKVEWG
PLNADLHNLGLYAVAEGKIIIYDVSNPDQGPSFLDLPNNLYVYKFAWKPDFRLLLLNGKD
GSLLVLTIDLVAITTLYPNEKGLNGIVWHPDSFMDKTDVSPRCNWFAATTVKGILVYDCG
SIRESDNFAENIVATFEGHVKPPLALAWCLFDGNRIASTASDGLVHVWDVSTKSAVATFV
DFCLSHNPAVVWSPIDPDLIITGDRMIQVWRVSKNPPKLDEEFLAERKRLVAKMAKSDDK
VDKSRFLIEVPKAKTPAKNYIVPSFYVSNDENLEMQVGNMKKLLDQVENKNTGDGKLGPL
ELFGSKEQVSQLLDTNYNQQKKEGKFKSCELISLWKGDVGDYIQTAIDENRVNPTTINLA
AMVSPKLWQDACLSYAKKLSEDAASDPFETAMYFLACHKIEEAINSLCTSLMFKEALVLA
KQRLPENSVFITEVTQKWAEHCVTTGNFENAAFCYISIKEYENAAKVLARRNHKEFLDFA
AELAEKAGNKGLHDSIKYKCSELENTPQNGAGDEMPSRIDAVLEKMTENQDAVSESGSEI
TNGSHPESAHNEN
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgaacgagttagctgttcctcctgcgcccctttggtacaggagttcagtgttggcgtgt
gcccctgacaataccttggtgtatggcgcaaaaagcgatattgttatcgttagggaaaaa
ggccccgaagaaccggccgaagtgaaattgattcattcggctcactctaaacttctcact
tccgttagtttgaacaggagatggaaggagccccattcgtacgtggtgtccctgggggaa
gacagcgtgatgaaggtgtgggacttggataccttcgagaagaaaacgtcgaatagggat
catgtggaacacaaaaaccccgtaattggggccgtttttgcgggtgatgatcgcgtcgta
agtgcgtcatcgaccggttttgtacacgtctggaatatcaacacgaatgagtccaagcct
ttggtagatttattcaaaagtaaagtcactctgacttgtctttcgtcgtgcccccatgcc
ggctggctcatggcctttggactaaataacggtgtggtgatcgtggccgatttgcgtcgc
aatgggcaagttttgtataaattgagggggcattatcaggcggttgtttgcttgtcttgg
tgtccagcacccgtaaatatctttccgagacatggccagaatacggttaaaaataaatca
agcgaaagtgagcacaatgagggttctagttcagataagacagttgagaccaaagaaaag
gtcaatccttgggtaaatctagttcatgcagatgatggcgaagcctcatctggtaaagaa
accctctcggacacaatctccgattttttgaaagattgtcatcttttgaaaagtaagata
ttagggcttgaaccagaacttgtaaaatcagcggaagtaaaaaactcagccgctgataac
gaggcagaaagcgaagttgaatgtgaacgtgagtttgtgcctgaagtggactgtggtagg
cctctgccgaaactgtacgacccaagtggcgactttttggacgattctgtgctagattcc
gaaattatcgaagataaagatgaaggaaatgagaaggatattgagcacacgggctcagaa
gtgaagactgatcaaacggacgaaacccgcgagaagtttgactcgccggaaaaatccgaa
tgtgatagcgttctggaatcagaaactgaaaaacatgataatactccagaggagtcgcca
aaaattgctactccagaggaatctccaaaggttgtagaaccgattgaggaagaaccaaga
gctgagtatttgctcgcatcgtgtggaaaagacaaaagtgtttacatctggcgggcgggg
actgacggtagaatgcagacgttcttccaagccgctaaaaagggcaacaatcgcaggaag
aacgaaagcacttggatgtccctgtgttggattgccccagatttattactgacctcgtca
acaaaggacgaacttctagcctggcctttgcccaaacccaaaacacccaagcaataccga
gttgtccaccttgaacactcatccctcattttcaacatcgtggcccctcccaagtacacg
acggcgttcaattggcgcgaaaaacacgaacttagtgcgtggacttggagccaagacgga
aacttggtttgttttgacttggacgcggaaaaaacacggatgtgtttttcgtgcataact
gcgttcatcacttgttgcgatacttcacctttggatcccaatcgacttgcgatcggtttg
aaagacggtggtatcaaaatctgggatttgagtctcccacatactaaaactatcacaatg
cagaaataccatcccaaatatacgcacaaagttaccacgattgcctggcaccctaccagg
gaaatgtttctagggttcgggactgaggaaggacgcgtcggctcgattgacctcatttcg
aagaaaacaacgcttttttctcactactttcacagccaagtgtataaagtcgagtggggg
cctttgaatgcggacttacacaacttagggctttatgcggtggctgagggcaagattatc
atttatgacgtatcaaaccccgaccaagggccgtctttcttggaccttcccaacaacttg
tacgtctataaattcgcctggaagccggactttcgtttgcttttgttgaacggaaaagac
ggttctttgttggtgctaacgatcgatttagtggccattactacgctttatccgaacgaa
aaaggccttaacggaatcgtgtggcatcctgattctttcatggacaaaaccgacgtttcc
cctcgttgtaactggtttgcagcgaccacagttaaagggatcttggtctacgattgcggg
tcaatccgagaaagtgacaattttgccgaaaacattgtcgctacgtttgagggacatgtg
aagccgcctttggccttagcgtggtgtctttttgatggtaatagaatcgcgtcgactgct
tcggatggactggtccatgtgtgggacgtgtcaacgaaatcagcagttgcgacttttgtt
gacttctgcctgagtcataatccggcagttgtttggagtccgatcgatccagatttgatt
attacaggtgataggatgattcaggtttggagagtttccaaaaatccgccaaaattggac
gaagagtttctagctgagaggaaacgtcttgtggctaaaatggccaaaagcgatgacaaa
gttgacaaaagtcgatttttaattgaggtgccgaaagccaaaactccagctaaaaactac
atagtgcctagtttttacgtatcaaatgatgagaacctggaaatgcaagtgggcaatatg
aaaaagttgttagaccaagttgaaaataaaaatacaggtgatggcaagttagggcccctt
gagttatttgggtccaaggaacaagtgtcgcaacttttagacacaaattataatcaacag
aaaaaagagggtaaatttaaatcttgtgagttgatttcgctgtggaaaggggacgtaggt
gattatattcaaactgccattgatgagaatcgcgtcaaccccacgactattaatttggcc
gcaatggtttcgccaaaattatggcaagatgcgtgtctgtcatacgcgaaaaaattgtca
gaggatgccgcgtctgatccgttcgagacagcaatgtactttttagcgtgccataaaatc
gaagaagcgataaattcactgtgcaccagtctcatgtttaaggaagctttagttttggcc
aaacagaggcttccggaaaatagcgtgtttatcacggaagtgacgcaaaaatgggccgaa
cattgtgtaaccaccggcaatttcgaaaatgctgctttttgttatatttcgattaaggaa
tatgaaaatgccgccaaggttttagcgcgaaggaatcataaggaatttctcgattttgca
gccgaattggccgaaaaagcgggaaataaaggactgcatgactcgattaaatataagtgt
agtgaactggaaaatactccacaaaatggtgcaggtgacgaaatgccgtctcgaattgat
gccgttttggagaaaatgactgagaatcaagatgcagtttcagagagtggctctgaaatt
accaatggatctcacccggaatcagcccataatgaaaattag

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