Tribolium castaneum (red flour beetle): 100141744
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Entry
100141744 CDS
T01046
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
100141744
03041 Spliceosome [BR:
tca03041
]
100141744
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100141744
mRNA cycle factors
P-body specific factors
100141744
Spliceosome [BR:
tca03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100141744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_GEMI5
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40
Beta-prop_EML_2
Beta-prop_RIG_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_pof12
Tricorn_2nd
RNAseD_HRDC_C
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
100141744
NCBI-ProteinID:
XP_001815774
UniProt:
D1ZZV0
LinkDB
All DBs
Position
LG4:5068805..5073478
Genome browser
AA seq
1213 aa
AA seq
DB search
MNELAVPPAPLWYRSSVLACAPDNTLVYGAKSDIVIVREKGPEEPAEVKLIHSAHSKLLT
SVSLNRRWKEPHSYVVSLGEDSVMKVWDLDTFEKKTSNRDHVEHKNPVIGAVFAGDDRVV
SASSTGFVHVWNINTNESKPLVDLFKSKVTLTCLSSCPHAGWLMAFGLNNGVVIVADLRR
NGQVLYKLRGHYQAVVCLSWCPAPVNIFPRHGQNTVKNKSSESEHNEGSSSDKTVETKEK
VNPWVNLVHADDGEASSGKETLSDTISDFLKDCHLLKSKILGLEPELVKSAEVKNSAADN
EAESEVECEREFVPEVDCGRPLPKLYDPSGDFLDDSVLDSEIIEDKDEGNEKDIEHTGSE
VKTDQTDETREKFDSPEKSECDSVLESETEKHDNTPEESPKIATPEESPKVVEPIEEEPR
AEYLLASCGKDKSVYIWRAGTDGRMQTFFQAAKKGNNRRKNESTWMSLCWIAPDLLLTSS
TKDELLAWPLPKPKTPKQYRVVHLEHSSLIFNIVAPPKYTTAFNWREKHELSAWTWSQDG
NLVCFDLDAEKTRMCFSCITAFITCCDTSPLDPNRLAIGLKDGGIKIWDLSLPHTKTITM
QKYHPKYTHKVTTIAWHPTREMFLGFGTEEGRVGSIDLISKKTTLFSHYFHSQVYKVEWG
PLNADLHNLGLYAVAEGKIIIYDVSNPDQGPSFLDLPNNLYVYKFAWKPDFRLLLLNGKD
GSLLVLTIDLVAITTLYPNEKGLNGIVWHPDSFMDKTDVSPRCNWFAATTVKGILVYDCG
SIRESDNFAENIVATFEGHVKPPLALAWCLFDGNRIASTASDGLVHVWDVSTKSAVATFV
DFCLSHNPAVVWSPIDPDLIITGDRMIQVWRVSKNPPKLDEEFLAERKRLVAKMAKSDDK
VDKSRFLIEVPKAKTPAKNYIVPSFYVSNDENLEMQVGNMKKLLDQVENKNTGDGKLGPL
ELFGSKEQVSQLLDTNYNQQKKEGKFKSCELISLWKGDVGDYIQTAIDENRVNPTTINLA
AMVSPKLWQDACLSYAKKLSEDAASDPFETAMYFLACHKIEEAINSLCTSLMFKEALVLA
KQRLPENSVFITEVTQKWAEHCVTTGNFENAAFCYISIKEYENAAKVLARRNHKEFLDFA
AELAEKAGNKGLHDSIKYKCSELENTPQNGAGDEMPSRIDAVLEKMTENQDAVSESGSEI
TNGSHPESAHNEN
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttagctgttcctcctgcgcccctttggtacaggagttcagtgttggcgtgt
gcccctgacaataccttggtgtatggcgcaaaaagcgatattgttatcgttagggaaaaa
ggccccgaagaaccggccgaagtgaaattgattcattcggctcactctaaacttctcact
tccgttagtttgaacaggagatggaaggagccccattcgtacgtggtgtccctgggggaa
gacagcgtgatgaaggtgtgggacttggataccttcgagaagaaaacgtcgaatagggat
catgtggaacacaaaaaccccgtaattggggccgtttttgcgggtgatgatcgcgtcgta
agtgcgtcatcgaccggttttgtacacgtctggaatatcaacacgaatgagtccaagcct
ttggtagatttattcaaaagtaaagtcactctgacttgtctttcgtcgtgcccccatgcc
ggctggctcatggcctttggactaaataacggtgtggtgatcgtggccgatttgcgtcgc
aatgggcaagttttgtataaattgagggggcattatcaggcggttgtttgcttgtcttgg
tgtccagcacccgtaaatatctttccgagacatggccagaatacggttaaaaataaatca
agcgaaagtgagcacaatgagggttctagttcagataagacagttgagaccaaagaaaag
gtcaatccttgggtaaatctagttcatgcagatgatggcgaagcctcatctggtaaagaa
accctctcggacacaatctccgattttttgaaagattgtcatcttttgaaaagtaagata
ttagggcttgaaccagaacttgtaaaatcagcggaagtaaaaaactcagccgctgataac
gaggcagaaagcgaagttgaatgtgaacgtgagtttgtgcctgaagtggactgtggtagg
cctctgccgaaactgtacgacccaagtggcgactttttggacgattctgtgctagattcc
gaaattatcgaagataaagatgaaggaaatgagaaggatattgagcacacgggctcagaa
gtgaagactgatcaaacggacgaaacccgcgagaagtttgactcgccggaaaaatccgaa
tgtgatagcgttctggaatcagaaactgaaaaacatgataatactccagaggagtcgcca
aaaattgctactccagaggaatctccaaaggttgtagaaccgattgaggaagaaccaaga
gctgagtatttgctcgcatcgtgtggaaaagacaaaagtgtttacatctggcgggcgggg
actgacggtagaatgcagacgttcttccaagccgctaaaaagggcaacaatcgcaggaag
aacgaaagcacttggatgtccctgtgttggattgccccagatttattactgacctcgtca
acaaaggacgaacttctagcctggcctttgcccaaacccaaaacacccaagcaataccga
gttgtccaccttgaacactcatccctcattttcaacatcgtggcccctcccaagtacacg
acggcgttcaattggcgcgaaaaacacgaacttagtgcgtggacttggagccaagacgga
aacttggtttgttttgacttggacgcggaaaaaacacggatgtgtttttcgtgcataact
gcgttcatcacttgttgcgatacttcacctttggatcccaatcgacttgcgatcggtttg
aaagacggtggtatcaaaatctgggatttgagtctcccacatactaaaactatcacaatg
cagaaataccatcccaaatatacgcacaaagttaccacgattgcctggcaccctaccagg
gaaatgtttctagggttcgggactgaggaaggacgcgtcggctcgattgacctcatttcg
aagaaaacaacgcttttttctcactactttcacagccaagtgtataaagtcgagtggggg
cctttgaatgcggacttacacaacttagggctttatgcggtggctgagggcaagattatc
atttatgacgtatcaaaccccgaccaagggccgtctttcttggaccttcccaacaacttg
tacgtctataaattcgcctggaagccggactttcgtttgcttttgttgaacggaaaagac
ggttctttgttggtgctaacgatcgatttagtggccattactacgctttatccgaacgaa
aaaggccttaacggaatcgtgtggcatcctgattctttcatggacaaaaccgacgtttcc
cctcgttgtaactggtttgcagcgaccacagttaaagggatcttggtctacgattgcggg
tcaatccgagaaagtgacaattttgccgaaaacattgtcgctacgtttgagggacatgtg
aagccgcctttggccttagcgtggtgtctttttgatggtaatagaatcgcgtcgactgct
tcggatggactggtccatgtgtgggacgtgtcaacgaaatcagcagttgcgacttttgtt
gacttctgcctgagtcataatccggcagttgtttggagtccgatcgatccagatttgatt
attacaggtgataggatgattcaggtttggagagtttccaaaaatccgccaaaattggac
gaagagtttctagctgagaggaaacgtcttgtggctaaaatggccaaaagcgatgacaaa
gttgacaaaagtcgatttttaattgaggtgccgaaagccaaaactccagctaaaaactac
atagtgcctagtttttacgtatcaaatgatgagaacctggaaatgcaagtgggcaatatg
aaaaagttgttagaccaagttgaaaataaaaatacaggtgatggcaagttagggcccctt
gagttatttgggtccaaggaacaagtgtcgcaacttttagacacaaattataatcaacag
aaaaaagagggtaaatttaaatcttgtgagttgatttcgctgtggaaaggggacgtaggt
gattatattcaaactgccattgatgagaatcgcgtcaaccccacgactattaatttggcc
gcaatggtttcgccaaaattatggcaagatgcgtgtctgtcatacgcgaaaaaattgtca
gaggatgccgcgtctgatccgttcgagacagcaatgtactttttagcgtgccataaaatc
gaagaagcgataaattcactgtgcaccagtctcatgtttaaggaagctttagttttggcc
aaacagaggcttccggaaaatagcgtgtttatcacggaagtgacgcaaaaatgggccgaa
cattgtgtaaccaccggcaatttcgaaaatgctgctttttgttatatttcgattaaggaa
tatgaaaatgccgccaaggttttagcgcgaaggaatcataaggaatttctcgattttgca
gccgaattggccgaaaaagcgggaaataaaggactgcatgactcgattaaatataagtgt
agtgaactggaaaatactccacaaaatggtgcaggtgacgaaatgccgtctcgaattgat
gccgttttggagaaaatgactgagaatcaagatgcagtttcagagagtggctctgaaatt
accaatggatctcacccggaatcagcccataatgaaaattag
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