Tribolium castaneum (red flour beetle): 100141769
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Entry
100141769 CDS
T01046
Symbol
Rm62
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100141769 (Rm62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tca03041
]
100141769 (Rm62)
03009 Ribosome biogenesis [BR:
tca03009
]
100141769 (Rm62)
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100141769 (Rm62)
Spliceosome [BR:
tca03041
]
Complex A
U1 snRNP components
U1 related factors
100141769 (Rm62)
Complex B
100141769 (Rm62)
Ribosome biogenesis [BR:
tca03009
]
Eukaryotic type
Pre-60S particles
Helicases
100141769 (Rm62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100141769
NCBI-ProteinID:
NP_001164095
BEETLEBASE:
TC002368
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Position
Un
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AA seq
549 aa
AA seq
DB search
MSYGKQNGGSYRGRGSENGFGGGASRNGFGGGSRFKNGGGGGGGSRFGGRSGGGGSPGNR
LRKPNWDMKNLRPFKKDFYVPHPAVANRSKYEVEQYRRSKEITIDGDAPNPIQNFEEACF
PDYVQHEIQKQGYDTPTAIQAQGWPIAMSGKDLVGIAQTGSGKTLAYILPAIVHINNQPS
IARGDGPIALVLAPTRELAQQIQQVAHDFGSSSYVRNTCIFGGAPKGPQARDLERGVEIC
IATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT
WPKEVRKLAQDFLRNYVQINIGSLQLSANHNILQIVDVCQEHEKETKLNNLLQEIGNNGE
PGAKIIIFVETKKKVESITRTIRRYGWPAVCMHGDKSQQERDFVLREFRNGKSSILIATD
VAARGLDVEGIKYVINYDYPNSSEDYIHRIGRTGRSDTTGTSYAFFTPSNFRQAKDLVSV
LKEANQAINPRLSEMANRCSSYGSKGGSGGGGGRWGYGGSFRGRENSGPRNHQRFTNGGR
SNGYSNGSY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtaaacaaaatggcggatcgtatcgaggccgtggctccgagaacggtttc
ggaggcggcgcaagtcgcaacgggttcgggggcggcagccgcttcaagaacggtgggggc
gggggcggtggaagccgattcggcggccgcagcggcggcggcggatccccgggcaaccgc
ctccgaaaacccaattgggacatgaagaacttgcgccctttcaaaaaagatttctacgtc
cctcaccccgctgttgccaaccggtcaaagtacgaggtcgaacagtacagaaggtccaag
gaaatcacgatagatggcgatgcgcccaaccctatccagaacttcgaagaggcgtgtttc
cccgattatgtgcaacacgagatccagaaacagggatacgacactccaacggccatccag
gcgcaagggtggcccattgccatgagcgggaaggatttggtgggcattgcccagacgggg
tcagggaaaaccctggcttacatcctaccagcgatcgtccatatcaataaccagccatct
atcgcacgtggcgatggacccatagctctagttttggcccccacgcgagaactcgcccaa
caaatccagcaagtggcccatgatttcggaagttcgtcctatgttcgcaatacctgtatt
tttggtggcgcccccaaggggccccaagccagggatttggaacgtggggttgaaatttgt
attgcgactcccggccgtttgattgatttcctggagaagggaacaacgaatttacaaaga
tgtacctatttggtcctggatgaagctgataggatgctggatatgggttttgagccccaa
atacgcaaaattattgaacagatcagacccgacagacagaccttgatgtggtcagccact
tggcccaaagaagtccgaaaattggcacaagatttcctgagaaactacgtacaaatcaat
attgggtcgttgcaattgtcggccaaccacaacattcttcaaatcgttgatgtttgccag
gaacacgaaaaggaaacaaaattgaataacttgttgcaagaaatcggcaataacggcgag
cctggagcaaaaatcattatattcgtagaaaccaaaaagaaggtagagagcataacccgc
acaattagacgttacggatggcctgccgtttgcatgcatggtgacaagagccaacaggag
cgcgatttcgtcttgagagagttccgaaatggcaaatcgagcattttaattgctacagac
gtagctgctcgtggcttggatgtggaaggaattaaatatgtcataaactatgactacccc
aactcttcagaagattatattcacagaataggaaggacaggccgatctgacaccaccggc
acctcttacgctttcttcactccatccaatttccgacaagccaaagatttggtttccgtt
cttaaggaagcaaaccaggctatcaatccgagactgtctgagatggcgaatcgttgtagc
agttacggcagcaaagggggtagcggcggtggcggtggtcgttggggctacggcggaagt
tttcgagggcgcgaaaacagcggtccaagaaatcaccagagattcactaatggcggacga
tccaacggatatagcaacggaagttattaa
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