Tribolium castaneum (red flour beetle): 100141863
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Entry
100141863 CDS
T01046
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100141863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
100141863
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100141863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
VPS53_C
Motif
Other DBs
NCBI-GeneID:
100141863
NCBI-ProteinID:
XP_008201220
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All DBs
Position
LG2:complement(10704096..10707182)
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AA seq
581 aa
AA seq
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MHPATVNPNLTTPQTFSYKDILVKKLVRAVACSVISQIVVLLIYIIVANANILSPAEWTS
SILNTFTHLSTWIFVVIFSLIIFAQCLICAKDYVLMTFYCSTRFQQICRIFSVHNFVLLL
LHVVTGGAFVWQILSVIESSNQSLTTKCIDENRSCLVEDVFFLIIGGFWTGFYFFTKVYV
STKQLVFPVIQQRKFLQFRTNVSVLFKQSLAMAVWPTFYFALFYYFWGNQLESRFVALVN
LDRASRESSVLVYVYLWWFATLYCFSNNLMRFFFHLFLTEPVQFPIVKENVYILTLQEAI
NMDNLPIIQNLACLDLFLLSQWSPMRRQLLFTLSQPGGHPHNWNSLTESVLKLFSDYTNL
LKKSTEPPTQEKPKKQTETITPFSPVVQSPQTDPSLKFRNLRNLSMSSDYLDVVNVTHTG
SSNSVKSFKKSIDESVQKIVSFVKILFGINFLFGELPQVNIQKCLGNGQLIIWASQGISE
LAAVSLVEDKYGIVQKDLPVIISSLVQLKQSLDKLNKVPSLSRKVAALDDFNYRMKNAVI
AAVKHSLFKICLNFGEYFSDVPLSKDVLHYLQINFMLKTPN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcacccggcgacagtaaatcctaacctcacaactccacaaacgttcagctacaaagac
atccttgtaaagaaattagtccgtgccgtagcttgtagcgtaatttcccaaatagtcgta
cttttaatttatataatagtcgccaatgccaatattttatcaccggcggaatggacgagc
tcaatactcaacaccttcacacacttaagcacatggatttttgttgttattttctcgttg
atcatattcgcgcagtgcctgatatgtgccaaagattacgttttgatgactttctactgc
tcaacccgatttcagcaaatttgccgcatattctcggttcacaatttcgtccttcttctg
cttcatgtggtaacaggaggcgcgtttgtttggcaaatcctttccgttattgaaagtagt
aatcagtccttaaccactaagtgtattgacgagaatcgtagttgtttagttgaagacgtt
tttttcttaataattgggggtttctggaccggtttttatttttttacaaaagtgtatgtt
tcaaccaagcaattagtgtttcctgttatccaacagcggaagtttctgcagtttcgcacc
aatgtttctgtgttgtttaagcaaagtttggcaatggccgtttggcccactttttatttt
gctttattttattacttttgggggaatcaattagagagtcgttttgtggctttggttaat
ttggacagagcttcacgcgagagtagtgttttagtttatgtttatttgtggtggtttgcg
accttgtattgcttcagtaacaatctgatgcgattctttttccatttgttcctcaccgaa
ccggttcagtttccaattgttaaggaaaatgtttatattttaactctccaagaagccata
aacatggataatctaccaataattcaaaacctagcatgtttggacttattcctattatct
caatggtccccaatgcggcgacagttactcttcactttatcacaacctggaggacatccc
cacaactggaactccttgactgaaagtgtgctaaaactattctcggactacaccaacctt
ttgaaaaaatctacagaaccaccaacgcaagaaaaaccgaagaaacaaaccgaaaccatc
actccattttcaccagtggtccaatcacctcaaacagatccgagtctcaagttcaggaat
ttaagaaatttgtcgatgagtagtgattacttggatgtggtgaatgtcacacacactgga
tcttcaaatagcgtcaaatcgttcaagaaaagtattgatgaaagtgtccagaaaattgtt
tcgttcgtgaaaatcctgtttggaataaatttcctgtttggggagttgccccaagtcaac
attcagaagtgtttggggaatggacaattgataatttgggcaagtcagggaatttccgaa
ctggcggctgtttcgttggttgaggataaatacggcatagttcagaaggacttgcctgtg
attatatcaagtttggttcagttgaaacagagtttggacaaactgaacaaagtcccgtct
ttgtcgaggaaagtcgcagctctggacgatttcaattatcggatgaaaaatgctgttatt
gcagccgttaaacacagtttatttaaaatttgtttgaactttggggaatattttagcgat
gttccgctgagtaaagacgtcctgcattatttgcagattaattttatgttgaaaacgcct
aactaa
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