Tribolium castaneum (red flour beetle): 100142296
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Entry
100142296 CDS
T01046
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
100142296
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100142296
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Paf1
PRP38_assoc
DUF1416
Motif
Other DBs
NCBI-GeneID:
100142296
NCBI-ProteinID:
XP_015840675
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All DBs
Position
LG2:5841576..5844105
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AA seq
511 aa
AA seq
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MPPTIQNGTSTQEKRPVKPAEKRSDLICRVKYCNTLXDIPFDLKFISYPFDSSRFIQFNP
TSLERNYRYEVLTEHDLGVAIDLINKDIYAVEPGAMLDPADEKLLEEDILTPQDSKRSRH
HARSVSWLRRTEYISTEQTRFQPQSMDKVEAKVGYSIKKNLKNETLYMDRDSQIKAIEKT
FSDTTNPIEKHYSKPNVTAVEVLPVFPDFNLWKYPCAQVIFDSDPAPVGKQVPAQIEEMS
QAMIRGVMDERGEQFVAYFLPTEETLVKRREDFANEIPYQDDEEYEYKMAREYNWNVKSK
ASKGYEENYFFVIRQDGAYYNELETRVRLSKRRQKVGQPASNTRLIVKHRPMDANEFRMQ
RYREKQLEPAGDEDEEMEMEQNEEPQENEKESDAESSRSKSPSRSRSPSRSRSQSKSPSR
SRSRSKSRSRSRSKSRSRSRSKSASRSRSRSRSASGSRSPSKSPSRSRSGSKSRSPSRSK
SRSKSPSRSRSGSRSRSGSRSGSESGSKSGQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaacgatacaaaatggaacttccacgcaagaaaaacggcctgttaaaccagca
gaaaaaaggtccgacttgatatgcagggtgaaatattgcaacacgctgnctgatatcccg
tttgatttgaaatttatctcatacccgtttgattcatcaaggtttatacaatttaatcca
acctcgttggagagaaattatcggtatgaagtgctcactgaacatgatttgggcgttgcc
attgacttgattaacaaagatatttacgctgtggaaccaggtgctatgcttgatccagct
gatgagaaactcctagaagaagatatcctaacacctcaagactcgaaaaggtccagacac
catgcaagatctgtctcttggcttcgcaggactgaatacatttcaacagaacagactcga
ttccagccacaaagtatggataaagtcgaagcgaaagttggctacagtattaagaagaat
ttgaagaatgaaacattgtacatggaccgtgattcacaaatcaaggctattgagaaaacg
ttcagtgatacaacgaatccgattgaaaagcattacagcaagccgaatgtgactgctgtt
gaagtattgccagtgtttcccgatttcaatctgtggaaatatccatgtgctcaggttatt
tttgattcagatccagcgcctgttggtaaacaagtgcccgcgcagattgaggaaatgtca
caagctatgatcagaggtgtgatggacgaacgtggcgaacaattcgtcgcctacttcctc
ccaactgaagagactctagttaaaagacgggaagactttgctaacgagataccataccaa
gacgatgaagaatatgagtataaaatggcaagagaatacaactggaacgtgaagagtaaa
gcaagcaaaggttacgaagaaaattacttcttcgtaatcagacaagatggtgcctactat
aatgagctagaaacccgtgtcagattgagtaaacgtcgccagaaagttggccaacctgcc
agcaacacccgtcttatcgtcaaacaccgaccaatggatgcgaacgaattccgaatgcaa
agataccgcgaaaaacaactcgaacctgcaggcgatgaagacgaagaaatggaaatggaa
caaaacgaagaaccacaagaaaacgaaaaagaaagcgacgcggaatcgtcaagatccaaa
tcaccgtcacgttcaagatctccgtctagatcccgatcacagtctaaatctccctcacgg
tccagatccagatccaaatcgcgatcaagatccagatccaaatcgcggtcaagatccaga
tcaaaatctgcgtctagatccagatcacgttcacgctcggcttccggatcgcgatctcct
tccaaatcgccgtcacgatccagatccggatccaaatcacgatcaccatcacgttccaaa
tcacggagtaaatcaccgtccagatccagatccggatcgcggtcaagatccggatcccga
tctggatccgaatccggcagcaagtctggacagtga
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