Tribolium castaneum (red flour beetle): 100142567
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Entry
100142567 CDS
T01046
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100142567
03015 mRNA surveillance pathway
100142567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
100142567
03041 Spliceosome [BR:
tca03041
]
100142567
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100142567
Spliceosome [BR:
tca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100142567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100142567
NCBI-ProteinID:
XP_008194280
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All DBs
Position
LG5:complement(12690533..12696598)
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AA seq
952 aa
AA seq
DB search
MMMYTGTTTEQDNRFSDKEKKLLKQMKFSDCLSQRVDMSKIKLDVIKPWIQDKLTEILKI
DDDVVVDFVYNQLDEKFPDPKKIQINLTGFLHGKNAREFMAELWALLISAQENPSGIPDS
LLDLKREEIIKKKEKEEKEREIRDREREKEREREKSDKEKKYRDRDRSRSRRRSRSRSRP
RRRSVERSSRNNDRGKDKRSRSRSRSRIKIDDLRNNGNASPNERENNGREDSAKLESSTA
NSKHNSESSQPVSKLQAKLMSMAGGNGKQQQQQRNSRSRSKSVSRSRSKSASRSKSPSKS
HSRSRSSSSPRASKDRKSRSLSKDKEKRRSRSSSDGSKDNFEIRKKENSVQKKRHYRSNK
DSSDSEPDQDKGKRKKSLSKSPRRARKNSRDKSPRRKRSLSRKRSSSRKRSLSRKRSLSR
RRSPSRSKRSLSRRRRSISRSRRSTPRRASPRRRRSYSRRRSLSRNRRGRRSRSRRSPSR
RRRSPSRRRSSRDRRLRRSRSRDRNHRRLSRERRRSRSRDRRSRSRRRSSRDRGSLRRKS
PIRGKSRERLRKPSPSPVTRNDRRDQRDESRGSRPSVRRPDDRKEESFRRLDDSKREDLH
KSDKKLEEKRKASTSDSQTESDFKSKDRKKSKSRSISPEDNNLIPPHGPPRYSRSLSRTP
SPFIKANEFPPKTKTVPAAKDDKKKLKEKAELKTKKVTKKPSKSETDSNSSDSDSEGQKE
RERERKKIKAKKKTKKRDSSSSDSEVEYTSKKKDRDSSPEVEVKSKKGKDGKRSRRDSSE
DKVQKKRHQSSDSEDDKKIKKKRARSDSSDKGRKSKKDDSSDSDVPKSKSKKKVESSDDS
EVEKVDKDKSKKHRRDSSSDSEEDMKKRKRKKKVTKSASDSDEELESKKRKKDKRHKKKK
KHSKKHKKHKKKKVESEDSDNSDVEVVNDDEKKLREKALKSMKRQNSSDKSE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtatacgggcacaaccaccgagcaagacaatcgcttcagcgataaggaaaaa
aagctcctgaagcagatgaagttcagcgattgtttgagtcagagggttgatatgtccaaa
attaaacttgatgtcatcaagccgtggatccaagacaaattaacggaaatcttgaaaatt
gatgacgacgtcgtcgtcgattttgtttataatcaactagatgagaagtttcccgatcct
aaaaagatccaaatcaatcttacggggtttctgcatgggaaaaacgcgcgcgagttcatg
gccgagctgtgggcgctcttgatctcagcacaggagaacccgtccggaatccccgactca
ctcttggacttgaagcgtgaagaaatcataaaaaagaaggagaaagaggaaaaagagcgt
gagattcgggaccgggaaagagaaaaagagcgcgaacgcgaaaagtccgacaaggagaag
aaatacagggatagggacaggtccaggtctaggaggagatcacggtcaaggtcgcggccc
aggaggcggtcggttgaaaggtccagcaggaacaacgatagagggaaggacaagaggtca
aggagccgttccagatccaggatcaagattgatgatttgaggaacaacggcaacgcaagt
cccaacgaacgggagaataatggcagagaggattctgccaaattggaaagcagtactgcc
aattctaaacataattcagagagttcccagcccgtgtcaaagcttcaagcgaagctgatg
tccatggccggcggcaacggcaaacagcagcaacagcagcgtaactcccgttcccgttcg
aaatcagtatctcgctcccgttcaaagtcggcttcacgctccaagtcacccagcaaatcg
cattcgagatcccgttcgtcgtctagtccacgagcatcaaaggatcgcaagtcgcgctcc
ctctccaaggacaaggagaaacgtcgctcccgctccagttcggacggatccaaggacaac
ttcgagatcaggaagaaggagaacagcgtccagaagaaacgccactacagatccaacaag
gacagctccgacagcgaaccggaccaggacaagggcaagaggaagaagtcactgtcgaag
tcaccgcgacgcgccaggaaaaacagcagggataagagtcccagacgcaagaggagcttg
tccaggaagaggagcagctccaggaagaggtccctaagccgaaagaggagtctttcgaga
agacgtagtccatcgcgaagcaagaggagtctgagtagacgaaggcggagcatctcacgt
tcaaggcggagcaccccgcggagagcaagccctcgcaggagacgcagctatagcaggagg
aggagcttgagcaggaacagaaggggacgacgcagcagaagccgcaggagtcccagcagg
aggaggcgcagtcctagcagaaggaggagcagcagggataggaggcttagacgcagtaga
agccgtgaccggaaccacaggcgactttcccgggagagaaggcgctccaggtctagggat
aggcggtcgaggtcgaggaggaggtcgtctcgtgataggggaagtttgaggaggaagtca
ccaattagaggtaaatctagggaacgtctacgcaagcctagtccgagtcctgtgactaga
aatgatcgtcgggaccaaagggacgagtcacgtgggtctcgaccgtctgttaggagaccg
gacgacaggaaagaggaatctttccgtcgacttgacgattccaaaagagaagatcttcac
aaatcggataagaaattggaagagaaacgcaaggctagtacttctgatagtcaaactgaa
agcgacttcaaatccaaggataggaagaagtcaaagtctaggagtatcagtccagaggat
aataatttgattcctcctcacggcccgccacgatattcgcgaagcttgtctagaacgccg
tcgccgttcataaaagcaaacgaattcccgcctaaaactaagacagttcctgctgcgaag
gacgataagaagaaactcaaagaaaaggctgaattgaaaactaagaaggttacgaagaaa
ccttcaaagagtgagactgattcaaactcaagtgattcagatagtgagggacagaaagaa
agagagagggagaggaagaagataaaggcgaagaagaagacgaagaaacgcgattcgagt
tccagtgatagtgaagtggagtatacttctaagaagaaggatagagacagtagtcccgaa
gtggaagtcaagagtaagaaaggcaaagacggtaagagaagtaggcgcgacagcagcgag
gataaagtgcagaaaaagcgtcaccagagttccgattcggaagatgataaaaagattaag
aagaaacgtgcacgttctgatagttccgacaaaggccgtaaatcgaaaaaagatgattcg
agtgacagtgatgtccctaagagtaagagcaaaaagaaagtggagagttctgatgattct
gaagttgagaaagtcgataaagacaagtcaaagaaacacagaagggacagctcttcagac
agtgaggaagatatgaagaagcggaaacgtaaaaagaaggttacgaaatcggcgagcgat
tctgatgaagaacttgagtcgaagaaacgcaagaaagacaagaggcataaaaagaagaag
aagcactcgaaaaaacataagaaacataagaagaaaaaggtagaaagtgaagactctgat
aatagtgacgtcgaagttgttaatgacgatgagaaaaagttgagagaaaaggctctcaag
tcaatgaaaaggcaaaattcgagcgataagtcggagtaa
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