Tribolium castaneum (red flour beetle): 103312682
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Entry
103312682 CDS
T01046
Name
(RefSeq) nuclear RNA export factor 2
KO
K14284
nuclear RNA export factor
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03008
Ribosome biogenesis in eukaryotes
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103312682
03015 mRNA surveillance pathway
103312682
03008 Ribosome biogenesis in eukaryotes
103312682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
103312682
03009 Ribosome biogenesis [BR:
tca03009
]
103312682
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103312682
mRNA cycle factors
Stress granule specific factors
103312682
Ribosome biogenesis [BR:
tca03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103312682
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
NTF2
SnoaL_2
LRR_4
SnoaL_4
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
103312682
NCBI-ProteinID:
XP_008192188
UniProt:
D1ZZZ2
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All DBs
Position
LG4:complement(5379888..5382387)
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AA seq
513 aa
AA seq
DB search
MDFKTVIPSPDAITLNEINVCLISQFKAVLGVKTYWHKFFIIETFGLTRNVVLKTLLEHV
KPLEFIPLFYTQEGKGAYFFARICGPVIEKFCRDKLTVPNPFGSRKPFKLKIVLKYTTTY
QVTVDLYCRNVLQVLQKRLKSRVLCLNNFVDDPDLNDFLLLSEPKLLAFVLNLAKVLKPT
AIKLCNNEIKSLDALKVLRPRSINSLDLRNNLIVDLAELKHLSNFDITELWLEGNPLCDL
YDEHSYVEQMVKYCPKIEKLDGFLLRQNGVPSFRRNFLCDVSASDVIDQFMRDYFTTYDS
KNLDKLESLYHNDAVFSLTAYHVNNQVSSANSCIKSYKQYSRNLVDTPNRDENLYTGSRE
IMKLFDLLPHCEHDPYSFTVDVMHYSEKRVIVVVTGVFMEIPNVKRILGFNRSFFLEFRD
SSLRIANEQLHVFNALTSQQAKAFKKQGVLQEVRNVTEKNQMLNIFVIITNLTKEWAKLF
LEECQYNLKHALLVFVDLYKRDKIPSHGFKPCD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggactttaagactgttattccatcccccgatgcaatcactctcaatgaaataaatgtc
tgcttaatcagccaatttaaagctgttcttggtgtgaagacatactggcacaagtttttt
attatcgaaacttttggcttaacgcgcaatgtggtgctaaaaactctcctagaacacgta
aaacccttggaatttattcccctgttttacacgcaagaaggcaaaggggcgtattttttt
gcaagaatttgtggcccagttatcgaaaaattttgtagggacaaactgacagtacccaac
ccttttggctctaggaagcctttcaaattaaaaatagtccttaaatacaccaccacttat
caggtgacggtagacttgtactgcagaaatgtcctgcaagttttacaaaaacgcctcaaa
tcgcgcgttttgtgtttgaataatttcgtggacgatccggatttgaacgattttcttctg
ttatcggaaccaaagctcctagctttcgttctaaacctagctaaagtcttaaaacccaca
gctattaagttgtgtaacaatgaaatcaagtctctggacgcactcaaagtgctgcgaccg
cgaagtattaactcgttggatttacgcaataacttaatcgtggatcttgcggagttaaag
catttgtcaaattttgatattactgagttgtggttggaaggaaaccctctgtgtgacttg
tatgacgagcacagttatgtggaacagatggttaagtactgtcccaaaatcgaaaaactt
gacggttttttattgaggcaaaacggagttccctcgtttcgtagaaatttcttatgtgat
gtttccgcaagtgatgttattgaccagtttatgcgagattattttacaacttacgactcc
aaaaatcttgataaacttgagtcactgtatcataacgatgccgtgttttctcttacagcg
tatcacgttaataatcaagtttcgtcagcaaattcgtgcataaaatcatacaaacagtat
tccagaaatttggtggatacaccaaaccgggacgaaaatttatacaccggaagtcgtgaa
ataatgaaattatttgacttgcttcctcattgtgaacacgatccttactcgtttacagtt
gatgtgatgcattacagcgaaaaacgtgtcattgttgttgtaacgggagtctttatggaa
attcccaacgttaaacgaattttgggatttaacagatctttttttctggagtttcgggat
agtagcttacgtattgcaaacgagcaactccacgtttttaacgccttaacttcacaacaa
gccaaggcgttcaaaaaacagggagttttgcaagaagtccgaaatgtgactgagaaaaat
caaatgttgaacatttttgttatcattacaaacctgaccaaagagtgggccaaactattt
ttagaggagtgccaatacaatttgaaacatgccttgttagtttttgtagatttatataag
agagacaaaatcccgtctcacggctttaagccttgcgattaa
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