Tribolium castaneum (red flour beetle): 103313172
Help
Entry
103313172 CDS
T01046
Name
(RefSeq) hydrocephalus-inducing protein homolog
Organism
tca
Tribolium castaneum (red flour beetle)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HYDIN_VesB_CFA65-like_Ig
Cep192_D4
Ig_CFAP65_4th
Cep192_D3
ASH
Ig_CFAP65_7th
Ig-CFAP74_4th
Ig_DLEC1_6th
Ig_CFAP65_8th
Cep192_D6
OCRL-like_ASH
Ig-CFAP74_2
Motif
Other DBs
NCBI-GeneID:
103313172
NCBI-ProteinID:
XP_015835633
LinkDB
All DBs
Position
LG5:11165541..11175177
Genome browser
AA seq
1754 aa
AA seq
DB search
MNFVPTLVGESCYRSLIFKNVGVISCKAIVEVCFDDDDQLSLVPGEETLPRLNLWEAGTP
MRHTNLVNLECQQVAKFRLKFEPSKVGTCKPEVKIHTVNNPFETKTIHVFCDGYYKDVTL
DGLRSYSRSSSIVSLETIPALGYSLQFGHVPLNTIEKTCFLIRNNSDYFTYKFEFPTFSE
VIFSPAVGHIRPKTNKQILAVFLSKNPVELNESRIECRVYKIEYSEPQTALLSWDDRQNL
VVWCPETVQSDHIFDNKSEPSASESREGSVSATNDDNAISAKKIEEKREPEIRVVPNSFQ
NIALFVSVVADFAEFLCDVNEIQIPDTFLLNKSSVDFVVENVSKVAFTLVWDLSMHDVPK
RINSGSFDDSEVNFLPPITKRQPTPLFGKEHFMHEDKARASSASTLFSCESLKSNRSGDS
WNEFHSLPFTISPEKTTIKPESKHTFTVTFAPVDVFDYVIQLKSCIENKEPKAKDIEIEV
KARSILPVYCFELDESNYVVEKRRGRKMCNDLLDENTKVVEFESVGLGIICTNCRKFLLK
NPTKEAFFYTWTLGHAVNPHLSCFHCHTQNGVVSKGKAVEMVFSFIPQECGTFEEFYFFA
IPLHNIRVTFLLVGFAREPRIYFDQNHLALAPTLVGVDVHKSLLLKNDENEKYWFKFGKF
SMLTEGLVVEPLSGVLAPREQLPIRFSLKPKRQGLVNFDFKVFVERIKNPLEVSISCQVY
EVEASISYVDQNGKEMHLNSGKINVINMGAMIPHQKYKVPFTIINIGKTAFEWYWAPHIQ
KIAGLFDIIFETNGEVLPAGETLKTEMTIIPLIKTSMKPHKIVLRIAYGPSYCLQLNGSA
GKPPFKLSFTEYDFGPCLLQKSPTKYYKTVLKFLNLNVWPMTFEKGKHSVHLSTNFESGE
VGPREEKLVTIYFHPLILGDHNIELPFYVNGKKTHVNIMGKAVPLKLAFINQTDKFVDFG
SVLVGKTCTKTVRVLNESECPVNVLFDFWDRLPKKAAKETPDESLEMPKEEAKKRKKGSK
KGSKKGSKKGSKKGSKKGSKKGSKGSKKKKGSKSTKSSKKSKKASVKTKTSKKSKKSKKS
KKTKKSKSSKSSKKSKKSAKTIPEETCRTPQKIEKQGIDYMTVSPQKYIKLGPQKTTEFT
ITFSPKERVQPFVEKIYYRSQSYIDAFCIVRGDAVAPEISLDRQHLTFGNVVVNFERMMN
VVLKNTGDINLKFNWLLDKKEENFSITPKKGFILAGTNLIFSVFFKPKTVKCWIKSKLIC
HISNIDKQLELAVSGSCINLPPPKATILFACPVRLSDTKSFAISNPTNQVWEIQPNISGD
NCFKTSEIIRIPAKHDDKCEIVYSPMTLHEHNALLSLPMPDGLIVTYNLKGKTNPPLPAG
QIRREIVCKVPHIEQLPVTNWLLVKQQFHVSTVMTGRITPKNLFSIGGNALIDVPPNGTR
PYDWSITPINEGELNLKVTFTNKATLEYLFYEIALKVLPNKHLDSIELSTCARIPVSKLI
KLENPVNVPVVYHMTCPKENISFEKTVTLEPHSVYYLELSYKPVREEQTQTSFEATSKEL
GTYSYNLILSVHAPVPEPATIFKTCLGQKITQKIEVVATRGSHFQFDNPVFSLDKVADDR
SLVINFEPNQIGKFQSQLLLKSNELGDFIYPLIGESCAPKPQGPYLLTYVNPVSITFKNP
FSVEKMFYFRAEPKDFRVKLKSEIIVAKKTMKVAVNLITQRTQETPKYPITGKMTIYCNE
PEISWVYYLKEDIE
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgtcccaactttggtcggcgaaagctgctaccggagtttgattttcaaaaat
gttggagttatttcgtgtaaagcgatagttgaagtgtgtttcgatgatgacgaccagttg
agtttggttccgggtgaggaaactttgcctcgtctgaacttgtgggaggccgggacgccg
atgcgacacacaaatttggtcaatttggagtgccaacaagtggcgaaatttcggctcaag
ttcgagccttcgaaagtcgggacttgtaaaccggaagttaagattcacactgttaataac
ccttttgagacaaaaactattcatgttttctgtgatgggtactataaggatgtgactctg
gatgggcttaggagctactccaggagctcatcgattgtgtccctggaaacaattccagcc
ctgggctactccctacagttcggtcacgtcccacttaacaccatcgaaaaaacatgtttc
ttgatccggaacaattccgattattttacctacaaattcgaattccccactttcagcgaa
gtgattttctccccagctgtgggccatatcaggcccaaaaccaacaaacaaatcctagct
gtgttcctttccaaaaatccagtcgaattgaacgagtcacgaatcgagtgccgagtttac
aagattgaatattcggaaccacaaacggcccttttatcgtgggacgaccgccagaatttg
gtagtttggtgtccagaaacggtccaaagtgaccacatttttgacaacaagagcgaacca
tcggccagtgaaagccgagaaggttcagtgtcagccacaaatgatgacaatgcgatcagt
gccaaaaaaattgaagaaaagcgagaacccgaaataagggttgtgccaaattcgttccaa
aacattgcacttttcgtcagtgtggtcgcagattttgctgaatttttatgcgatgttaat
gaaattcaaattcctgatacgtttctcctgaataaaagttcggttgattttgttgtcgaa
aatgtgagtaaagtggcttttacacttgtgtgggatttgtcgatgcatgatgttccgaaa
cgaatcaattcggggagttttgacgactcggaggtgaattttctgccgccgatcacaaaa
cgacagccgacgcctttatttggcaaagagcatttcatgcacgaagacaaagctcgcgct
tcctcagcttcgactttattcagctgtgagagcttgaaatcgaaccgaagtggtgactcc
tggaacgaatttcactctttacctttcacaataagccccgaaaaaaccacaattaaaccc
gagtcaaaacacacttttactgtaactttcgcccccgttgacgtcttcgattacgtgatc
caactcaaaagttgcatcgaaaataaagaaccgaaagccaaagacatcgaaatcgaagtc
aaagctcgcagcatcctcccagtttactgcttcgaactggacgaaagcaactacgtggtg
gaaaaacgccgagggcgaaaaatgtgcaacgacctcctcgacgaaaacacaaaagttgta
gagtttgaatcggtcggtttgggaattatttgcacaaattgcagaaaattcctgctgaaa
aacccaaccaaggaagctttcttctacacgtggacccttggccacgctgtcaacccccac
ctctcctgcttccactgccacacccagaacggcgtcgtctccaaaggcaaagccgtcgaa
atggtttttagtttcatcccgcaagagtgtggcactttcgaggagttttatttttttgca
attccgctgcacaacattcgggtcactttcctcctcgttgggtttgcacgcgaacccagg
atttatttcgaccaaaaccacctagccctagcccccactttggtgggggtcgatgtacac
aaaagtctcctattgaaaaatgacgagaacgagaaatattggttcaagtttgggaaattt
tcgatgctgacggaaggcctggttgtggagcccctgagtggggtcctggccccccgagag
caactccccataaggttttccctcaagccaaaaaggcaaggtttggtcaacttcgacttt
aaggtttttgttgaaaggatcaaaaatccgcttgaggtgagtatttcgtgccaggtttac
gaagtcgaagcttcgatctcgtacgtggaccagaacggcaaggaaatgcatctcaattcg
ggaaaaatcaatgttataaatatgggagctatgatcccccaccaaaaatacaaagttcct
tttacgataataaacattggaaaaacggcatttgagtggtattgggcgccacatattcaa
aaaattgcaggtctttttgatataattttcgagacaaacggtgaagttctaccggctggt
gaaacactgaagactgaaatgacgatcattcctttgattaaaactagcatgaaaccgcat
aaaatcgtcttgaggatcgcttatggtccctcgtactgtctccaattgaacggaagtgcc
gggaaaccccccttcaaactatcatttaccgaatatgactttggtccctgtttgctgcaa
aaatcgccaactaaatattacaaaaccgttctcaaatttttgaatcttaatgtttggccc
atgacttttgagaaaggcaaacattcggtccatttatccacaaattttgagtctggagaa
gtcggtcctagagaggaaaaactcgtcacaatttatttccatccccttatattaggggac
cataatattgaattaccgttctatgtgaatggtaaaaagacccatgtgaatattatgggc
aaagctgtgcccctgaaattggcttttatcaaccaaactgataaatttgtcgattttggg
tcggttctcgttggtaaaacttgcacaaaaacggtgcgagttttaaacgagagtgagtgt
ccagtcaatgttttgtttgatttttgggaccgcttgcccaagaaagcggccaaggaaacg
ccggatgagagtctggaaatgcccaaagaggaggcgaagaaacgtaagaaagggagtaaa
aaggggagtaaaaaggggagtaaaaaagggagtaaaaaggggagtaagaaagggagcaaa
aaagggagtaaaggtagcaagaaaaagaaagggagtaaatcaaccaaaagttcgaagaag
agtaagaaagcaagcgtcaaaacaaaaactagcaagaagagtaagaaatcgaagaaaagt
aaaaaaacaaagaagagtaaaagtagcaaaagtagcaaaaaatcgaaaaagtccgctaaa
acaatcccagaggaaacttgtagaacacctcaaaaaatcgaaaagcaaggcattgactac
atgaccgttagtcctcaaaaatacatcaagctgggtcctcaaaaaacaaccgaattcaca
attacgttcagtccgaaagaacgtgtccaaccttttgttgaaaaaatttactaccggagt
cagagctacatcgacgccttttgcatagttcggggcgatgccgtggccccggaaatctcc
ctagatagacaacacctgacctttggtaacgttgttgtcaattttgaacgcatgatgaac
gtcgttttgaaaaacacgggcgatatcaacttgaagttcaactggttgttggataaaaaa
gaagagaacttttccattaccccaaagaagggtttcatcctggcgggcacgaacctaatt
ttcagcgtttttttcaaaccgaaaaccgtcaaatgttggatcaaatcaaagctaatttgc
cacatttcaaacatcgataagcaactagagttggccgtttcggggtcttgtatcaatcta
ccgcccccgaaagctacgattttatttgcttgcccagttcggctctccgatactaaaagt
ttcgcgatttcaaatccgacgaatcaagtgtgggaaatccagcctaacatttctggggat
aattgttttaaaacgtcggaaatcatccggattccggccaaacacgacgataaatgcgaa
attgtctactctcctatgactttgcacgagcataacgcgttactttcgctcccaatgcct
gatgggttaatagtgacttacaatctcaagggaaaaaccaatcccccgcttcctgcggga
caaataaggcgtgaaatcgtctgcaaagtgccgcatattgagcaacttccagttaccaat
tggttactggtcaagcaacagtttcatgtttcgacagtgatgactggtcgaatcaccccc
aagaatttgttctcgattggaggcaacgccctaatagacgttcccccgaacggtacacga
ccgtacgattggagcatcactccaataaatgagggagaactaaatttgaaagtcactttc
actaacaaagccacgctggagtatctcttctacgaaatcgcgctaaaagttctccccaac
aagcacttagattcgatcgaactgtcgacttgtgcccgcattccggtcagtaaattgatc
aaattggaaaatccggtcaatgttccggtggtgtatcacatgacgtgccccaaagaaaac
atatcgtttgaaaaaacagtcactttggaaccccactctgtgtattatctcgaactgagc
tacaaacctgtacgtgaagaacaaacgcagacttctttcgaagccacgagcaaagaacta
gggacgtattcttacaatttaattttgtcggttcatgctccagtgcctgaacccgccaca
attttcaagacttgtctgggacagaaaataacacaaaagattgaagttgtggcaacgaga
ggctcccacttccaatttgataatcctgttttttccttggataaagtggcagatgaccga
agtctcgtaattaactttgaaccgaaccaaatcgggaagttccaaagccaattgctcctg
aaatcgaacgagttgggggactttatttatccattaattggtgaaagttgcgccccaaag
cctcaaggaccttatcttttgacttacgtaaaccctgtctcaatcactttcaaaaaccca
ttttcggtggagaaaatgttttattttcgggccgaaccgaaggatttcagagttaaactg
aaaagtgaaataattgtggcgaaaaagacgatgaaagttgctgttaatttgataacacag
aggacccaggagacacccaagtatcccataacgggaaaaatgaccatttattgtaacgag
cctgaaatttcgtgggtctattatttaaaggaagatattgaataa
DBGET
integrated database retrieval system
