Tribolium castaneum (red flour beetle): 103313577
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Entry
103313577 CDS
T01046
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103313577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
103313577
03036 Chromosome and associated proteins [BR:
tca03036
]
103313577
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103313577
Coactivators
SAGA/TFTC/STAGA complex
103313577
Chromosome and associated proteins [BR:
tca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103313577
STAGA complex
103313577
TFTC complex
103313577
SAGA complex
103313577
SLIK complex
103313577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
TFIID_NTD2
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_like
WD40_RFWD3
PROPPIN
Beta-prop_DCAF4
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
103313577
NCBI-ProteinID:
XP_008195391
LinkDB
All DBs
Position
LG7:complement(3087217..3089259)
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AA seq
534 aa
AA seq
DB search
MEEPKREFPKPKRSKTDHVKNIVHSYLQKRNYAPIGIENCRPDQQLTYSLIENEISRPNS
ILYSCYNSDPVVIDHNFTKFITWLKDCSKTKNCPDLEQLTAPFFCHLYLDILKGGHSDRA
ATFLKAHLPAIDKTKCDDFVKDLVNLFANDCDATCMIEQFRNNKYYVELLPQSLALLKKF
VAENCHVVFLHVLQTWFDIRQSEDRDNESEGKMDDKGAHNGVCLDDKLRKILDTINDLDK
EPKQIFLANISNTNEPISSALIKRTCGLIAYNQHNIVHLRPVHSYDPILGVRDCKEIKLN
DHTKRIYSINISPDCCKLVTGSEDSNLCIYDLNEIKLIKNCTGHLGPIYCTTISSNSVYA
ASGSLDTTARLWDLEKGHTLRVFVGHTEAITCIDFHPNCLYVATGSADRNIRLWSVDNGN
PLRLFHGCKGVVYGVLFSPLGDVLASVSDDKKVRLWDILNSKVNSEIKQKGLPATKLVWS
SDGKQLCTGAIDGAVRVWDLGQVLDSSSEPVISLNVNGKILALEYSFDTFACVT
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaagagccaaaacgcgagttccccaagcccaaacgttcaaaaaccgaccacgtgaag
aacatcgtgcactcctatctccagaaacgcaactacgccccgattggcattgaaaactgc
cgtcccgaccagcaactcacttactccctcatcgaaaacgaaatcagtcgccccaactca
atcctctacagttgttacaacagcgacccggtcgtaatcgaccacaacttcaccaaattc
atcacctggctcaaagactgctcaaaaacgaaaaactgtcccgatttggaacaactcaca
gccccctttttctgtcatttgtaccttgacattctcaaaggggggcactcggaccgcgct
gccacgttcctcaaagcgcaccttccggccatcgataagacgaaatgtgacgattttgtt
aaagacttggtgaatttattcgcaaatgattgtgacgccacttgcatgattgaacagttc
cgtaacaacaaatattacgtcgagttattgccacaatcgctcgccttattgaagaaattc
gtggcggaaaactgccacgttgtttttttacacgtgctacaaacgtggttcgatatcaga
caaagtgaggatagagataatgaaagtgaggggaaaatggacgacaagggggcgcacaat
ggcgtgtgtctcgacgacaagttacgcaaaattttggacacgatcaacgacctggacaag
gaaccgaaacaaattttcttggccaacatttcaaacaccaatgagccgatttcaagcgct
ttgattaaacgcacttgtggtttaatcgcctacaatcaacacaacatcgttcatctgcgc
cccgttcattcgtacgaccccattctgggggtacgtgactgcaaggaaatcaaattaaac
gatcacacgaaacgcatttattcaataaatatttcgcccgattgttgcaaacttgtgaca
ggttccgaagactcaaacttgtgcatttacgacttgaacgaaatcaaattaattaaaaat
tgtacgggtcatttgggccccatttactgcaccactattagtagtaatagtgtttacgca
gcgtcgggttcactggacacaacagcccggctttgggaccttgaaaaggggcacacgtta
cgtgtctttgtggggcacactgaagccatcacgtgtattgacttccatccgaattgtttg
tacgtggcgaccggttcagctgatcgtaatatccgactttggagtgttgataatgggaat
ccgttaagactttttcacggttgtaaaggtgtcgtttatggggttttatttagcccactt
ggtgatgttttggctagtgttagtgacgataaaaaagtgagactttgggatattttaaat
tcgaaggttaatagtgaaattaagcaaaaggggctgccggccactaaactagtgtggagt
agtgatgggaaacagttgtgtacgggggccattgatggggctgtgcgcgtgtgggacttg
ggacaggttttagacagctcgagtgaacctgtgattagtttaaacgtgaatggaaaaata
ctagctttggagtactcgttcgatacgttcgcttgtgttacttaa
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