Tribolium castaneum (red flour beetle): 103313858
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Entry
103313858 CDS
T01046
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103313858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
103313858
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103313858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Tautomerase
Phage_TAC_1
UPF0154
DUF2240
Cpf1_PI-like
Motif
Other DBs
NCBI-GeneID:
103313858
NCBI-ProteinID:
XP_008196414
UniProt:
D6WTI2
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All DBs
Position
LG7:complement(13468415..13469442)
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AA seq
205 aa
AA seq
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MSKLKSSCKLGILSRPDGSVLFSQDETTVVAGVYGPVESKANKALVEKACVEAHFRPKSG
LPGVKDRLNESIIRNVCEAAIATAMYPRTSVVVVIQEMQNNGQLISCALNAACLALLDSG
IDMKCMFAAVTCFIHKDESLVFTPPINEDQVKAMFMFVFDSVEKSIIASHTDGSFSVEQY
KDALSLCKEECANMFDFFKKSLTIK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactaaaatccagttgtaaattgggcattttgagcagaccggacggctctgtg
ttgttttcacaagatgagacaactgtggtagcaggtgtgtatggccctgttgagagcaag
gccaacaaggcattggtcgaaaaagcctgcgtagaggctcattttaggcctaagtctgga
ttgccaggtgtgaaagataggttaaatgaatcaatcattagaaatgtatgtgaggctgca
attgcaacagctatgtacccccggacttcggtcgtcgttgttatacaagaaatgcaaaat
aatggacagctaatttcgtgcgctctaaatgccgcatgtttggcgctacttgactcagga
atcgacatgaaatgcatgtttgctgccgtgacgtgttttatacacaaagatgaaagttta
gtatttacgccacctattaacgaagaccaggttaaagcaatgtttatgtttgtctttgat
agcgttgaaaaaagtataattgcgtcacatactgatggttcttttagtgttgaacaatac
aaggatgcgttaagtttatgtaaagaagagtgtgcgaatatgtttgatttttttaagaag
tctttgacaataaaataa
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