KEGG   Tribolium castaneum (red flour beetle): 654871
Entry
654871            CDS       T01046                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tca  Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:tca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tca04812]
    654871
Cytoskeleton proteins [BR:tca04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     654871
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_HPS5 eIF2A Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_LRRK2 PROPPIN WDR54 WD40_like WDCP
Other DBs
NCBI-GeneID: 654871
NCBI-ProteinID: XP_015835530
UniProt: A0A139WIM1
LinkDB
Position
LG5:5310188..5330284
AA seq 789 aa
MATPHKKSWKLQELMAHDAKVNCLSLGHKSGRVMVTGGDDMKVNLWAIGKHTCFMILSGH
TTPIECVQFNQFEELVCAGSRAGALKVWDLEAAKLVRTLNGHKSALKCVDFHPYGDFLAS
GSSDCSIKMWDSRKKGCIYTYNGHKATINSLKFSPDGHWIASGGDDATVKIWDLRVGKVL
KDFGEHLNSVTCVEFHPHEFLLASGSADRSVQFYDLENFSVVSSERDLGLVRCLCFNPDG
ERLFVGLRDYLKVVGWEPNRLFDSVMVNWSGVADISIAQNQLVGASFHLTNVQVYVVDLN
KVHPLNSSTETPPSPFTPNQSIRKSFSKAERPVSLKNRSLDVKTIEESTSGTDPEEESTA
EVTNLTDYNEIFKGRGLTRTPPPLEQPEPFQRPEHDYSDPTEPQILAEIPTDNFEALSLD
NNINCYSPPPAFTSSQYSRSKSNLDQVYVSRLTKQQDRENNISNINKNKNQLTTPRYYLQ
RQSSCKDVPENAPKANNSIIKHSVSDANISKSSISSRNSSRKNSFSRPSRNSTSVPNVSK
IPSARNSEKVAPVKTYITPTPEDVFVSSKLSPDSPSEEVEFVPMSMDRPAGLDLDDFLPK
NHRTLGFEQQLPDMSEAEVLGALVRGHEPMMAMLVTRQRSLKVVLAQLRSKDIKTATETA
VVMGDLAVLVDLLGVFNCKYTLWNLDLCVLILPKIQELLQSKFETYVTTGCNTLKLILKH
FGPVIKSNVQSPVGSFGVDIPREERYNKSVKCHEVLQNLRTFLVKKQSMPGSVGSTFREI
STLIQNTFD
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggcaaccccccacaagaagtcatggaagctccaggagctcatggcccacgacgccaaa
gtcaattgcctctctctggggcacaagtcgggccgcgtgatggtgacagggggcgacgac
atgaaagtcaacctgtgggccatcggcaagcacacctgcttcatgattctcagcggccac
acaacccccatagagtgcgtccaattcaaccagtttgaggagctagtgtgcgccggctcg
agggccggggccctcaaagtgtgggacttggaggcggccaagctggtccgcaccctcaac
ggccataaaagcgccctcaagtgtgtggattttcacccgtatggcgattttctagcgtct
gggagctccgactgttccatcaaaatgtgggatagtcgcaagaagggctgcatttacacc
tacaacggccacaaggccaccatcaacagtctgaagttcagccctgacgggcactggatc
gcctcagggggcgacgacgccacggtgaaaatctgggacttgagggttgggaaggtcctg
aaggactttggggagcatttgaattcggtgacttgtgtcgagttccatccgcatgagttc
ttgctggcatcgggaagtgccgaccgatctgtgcagttctacgacttggagaatttttcg
gtggtgtcgagtgagagggacttggggttggtgcggtgtttgtgctttaatcccgatggg
gagaggctgtttgtgggacttagggattacttgaaggttgtgggttgggagcccaacaga
cttttcgactcggtgatggttaattggagtggcgttgccgatatttccatcgctcaaaat
caactggtcggcgcttccttccacctaaccaacgtccaggtctacgtcgtcgacttgaac
aaagtacaccctttgaattcctcaacggaaacacccccgagtcctttcacacctaaccag
agtatcagaaagagtttttcgaaagcggaacgaccggtcagtttgaaaaaccgatcactg
gacgtcaaaacgatagaagagagcacctcggggaccgatccggaggaagaatccacggcc
gaagtgacgaatttaacggattataacgaaatattcaaggggcgaggactgactcggaca
ccgcctccgctcgaacaacctgagccgtttcaaaggcctgaacatgactattcggacccg
actgaacctcagatcttggccgaaattccaacagacaatttcgaggctctctccctggac
aacaacatcaactgttactcaccaccgcctgcgttcacttcttcacagtattcccgttca
aagtccaatctggatcaggtctatgtcagcaggctgacgaagcaacaagaccgcgaaaat
aacatttccaatatcaataagaataaaaatcaattgaccactccaaggtattatcttcag
aggcagagcagttgtaaagatgtgcctgaaaatgcgcccaaagcgaacaacagtattatt
aaacatagcgtctctgatgccaatatcagcaagagtagtatatcgtcaaggaactcatcg
agaaagaattccttttcaagacctagtcggaactctactagtgtacctaatgtttcgaaa
attcccagcgctaggaatagcgaaaaagtggcaccggttaaaacctacattacaccgacc
cctgaagatgtgtttgttagttcgaaactttcgccagatagtccatccgaagaagtggag
tttgttccgatgtcgatggacagaccggcaggactggacttggacgattttcttccgaaa
aaccatcgaacgcttggcttcgagcaacaactgccagatatgtccgaagctgaagtgttg
ggggctctggtgaggggtcacgagccgatgatggcaatgttggtgactcgtcagaggagt
ttgaaagtggttttggctcaattgaggagtaaggatattaagacagcgactgagactgca
gttgtgatgggtgatttggccgttttggtcgatttgttaggagtttttaattgtaaatat
acgttgtggaatttggatttgtgtgtgctgattttacccaagattcaagaattgcttcag
agtaaatttgaaacgtacgtgacgacgggttgtaacaccctcaagctcatcctgaagcat
ttcgggccagtgatcaagagcaacgttcaatccccggtgggcagcttcggcgtcgacatt
cctcgcgaggagcgttacaacaaatcggtcaagtgccacgaagtcttgcaaaacttgcgg
acttttctcgtcaaaaaacagtcaatgcccggttcagtgggctccacttttcgcgaaatc
agtactttaattcagaacaccttcgactga

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