KEGG   Tribolium castaneum (red flour beetle): 655044
Entry
655044            CDS       T01046                                 
Name
(RefSeq) histone deacetylase Rpd3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03082  ATP-dependent chromatin remodeling
tca03083  Polycomb repressive complex
tca04213  Longevity regulating pathway - multiple species
tca04330  Notch signaling pathway
tca04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    655044
   03083 Polycomb repressive complex
    655044
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    655044
   04350 TGF-beta signaling pathway
    655044
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    655044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tca03036]
    655044
Enzymes [BR:tca01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     655044
Chromosome and associated proteins [BR:tca03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     655044
   HDAC complexes
    Sin3A-HDAC complex
     655044
    BRAF-HDAC complex
     655044
    REST complex
     655044
    SHIP complex
     655044
    MiDAC complex
     655044
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     655044
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    655044
  Chromatin remodeling factors
   NuRD complex
    655044
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 655044
NCBI-ProteinID: XP_966633
UniProt: D6WG88
LinkDB
Position
LG3:complement(24021601..24027186)
AA seq 490 aa
MATQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
AEEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYEKI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFMMVGG
GGYTIRNVSRAWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLD
KIKTRLFENLRMLPHAPGVQVQAIPEDAINEESDGEEKVDKDERLPQKDLDKRIVPENEF
SDSEDEGEGGRRDNRTYKGRKRPRLEKGVDGKESTGDEKIKEELKSEKEEKEDSKANTID
DLKKDTGPTP
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggccacacaacctcacagtcggaaacgtgtttgttactattacgacagcgatattggg
aattactattatgggcaaggacaccccatgaagccccaccgcataaggatgacccataat
ttgctgctcaattatggtctgtacagaaaaatggagatttatcgcccccataaagccact
gccgaagaaatgaccaagtttcactcggatgactacattcgatttctcagatccatccga
cctgacaacatgtctgagtacaacaaacaaatgcagaggtttaatgtaggggaggactgt
cctgtctttgacggtttgtacgaattctgccaactctcagctgggggctcagtggcggca
gctgttaaattgaacaagcaagcgtccgaaatttgcatcaattggggcgggggtttgcat
cacgcgaaaaaatccgaagcttcgggcttttgctacgtaaatgatattgttctggggatt
ttggagctgttgaagtaccaccaacgcgtgttgtacatcgatattgacgtgcaccacggt
gacggtgtcgaagaggctttttacaccactgaccgggtgatgacagtctcgttccacaaa
tacggcgagtacttccccggaacgggcgatctcagagacattggcgccggcaaaggcaag
tactacgccgtcaatatcccccttcgtgacggcatggacgacgaatcctacgagaagatt
ttcgttccgataatcagcaaagttatggagacgttccaaccgagcgctgttgttctccaa
tgtggtgcagactccttaactggtgaccgcctggggtgcttcaacctcacggtgcgaggc
cacggcaagtgcgtggagttcgtcaaaaagtacaaccttccattcatgatggtcggaggt
ggtggatacaccattaggaacgtctccagagcatggacgtacgaaacttccgtcgctcta
ggtgtggaaatcgccaacgaactcccttataacgactacttcgagtactttggtcccgat
tttaagctacatatcagtccgagcaatatggccaatcagaacacccccgagtatttggat
aaaatcaagacgcgcttgtttgaaaatttgaggatgttgccgcacgcaccaggtgtgcaa
gttcaggcgattccagaagacgcgatcaatgaagaatcggatggagaggagaaagttgac
aaagacgagagactacctcagaaagatctcgataagaggatcgtgccagaaaatgaattt
tccgatagtgaggacgagggagaaggggggcgaagagacaatcggacgtataagggacga
aagaggccgcggcttgaaaaaggggttgatgggaaagaatcaacaggggatgaaaaaatc
aaagaagaactaaaatctgaaaaagaagagaaagaagatagtaaagcgaacacaattgat
gatttgaagaaagatacgggaccaactccgtga

DBGET integrated database retrieval system