Tribolium castaneum (red flour beetle): 655471
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Entry
655471 CDS
T01046
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
655471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
655471
03019 Messenger RNA biogenesis [BR:
tca03019
]
655471
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
655471
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
655471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
655471
NCBI-ProteinID:
XP_008199600
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All DBs
Position
LG2:455609..456709
Genome browser
AA seq
280 aa
AA seq
DB search
MECIVANVDHIKFDIEVALDEQFGALPLPFPGMDKSIAAVCQFYTSIQGCQKGPQCPFRH
VRGDRTIVCKHWLRGLCKKGDQCEFXHEYDMTKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLAGFCPEGPNCKYVHPRFELPAPPDQVQ
KDKKATPVIICHFCNEHGHKAIHCNKMNSDNRDALNDENRKQNDHYEPQNSYLQKMLPKK
LEDVTCYKCGTKGHYANRCPKGHLAFLSQAKSNQDGQGDQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcattgtggccaacgtggaccacataaaattcgacattgaagtggctctagat
gagcaattcggcgctttgcccttaccatttcccggaatggacaaatcaattgcggccgtt
tgtcagttttacacttcaatacaaggctgtcaaaagggcccccaatgcccgtttcgtcac
gtgcgaggcgaccgaaccattgtgtgcaaacactggctgagaggtctttgcaagaaaggc
gaccagtgcgagtttntacacgagtatgacatgacgaaaatgcccgagtgttacttctat
tcgagatttaacgcttgtcacaataaagagtgtccgtttttacacatagatcctgagagt
aaaatcaaggattgtccttggtatgaccgtgggttttgtcgacatgggccccactgtcgt
cacagacacgtgcgcagggttttgtgtacgaattacttggccggcttttgccccgaaggg
ccaaactgcaagtatgtgcacccaaggtttgagttgcctgcgccccctgatcaggtgcag
aaggacaagaaagccactcctgttattatttgtcacttctgtaacgaacatggacacaag
gcgatacattgtaataagatgaatagtgataacagagacgccttaaatgacgagaatcga
aaacagaatgatcattatgagcctcagaactcttatttgcagaagatgttgcctaagaag
ctggaagacgttacttgttacaaatgtggtacaaaggggcattacgcaaatcggtgccct
aaagggcacttggcgtttttgtcacaggccaagagcaatcaggatggacaaggtgatcaa
taa
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