Tribolium castaneum (red flour beetle): 655543
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Entry
655543 CDS
T01046
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
655543
03036 Chromosome and associated proteins [BR:
tca03036
]
655543
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
655543
Chromosome and associated proteins [BR:
tca03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
655543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
SH2
Spt6_S1
HHH_9
S1
Tex_YqgF
HHH_3
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
655543
NCBI-ProteinID:
XP_008196911
LinkDB
All DBs
Position
LG8:complement(11004633..11013784)
Genome browser
AA seq
1799 aa
AA seq
DB search
MSDFVESEAEESEEEELEPHERKKLKKVKAVDSSDEEEEDDDERLREELKDLIDDNPIEE
SEGEDSDASGGEKRKKSDDELDDRLEDEDYDLIEENLGVKVERRKFKRLRRIQDEESDGE
EQGDESQDRDAIAMDLFSDDDDERRSERSHRPTAEPEQFNEEEEEGDYSDADDFIVDDDG
RPIAEKKRKRKPIFTDAALQEAQETFGVDFDFDEFTKYEQDDYEEDEDEEDEYEEDEEGE
RRRRPKKTARKKPTKKSIFEVYEPSELKRGFFTDLDNEIRNTDIPERMQLREVPITSVPE
DSTELDVESEWIYKQAFCKATVSNMDANLTMEARERQKKGPQTIGKIRKALDFMRNQQLE
VPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKSRKENLLALFEKMRSYQLDQIMKDP
DAPIPENVRLIRDSDIERLNSVQTAEELQDVHNHFVLYYAQDLPAMHAAWRAKEKERKKQ
EKRAARLKLIAESEEGAEIPEDMDDDQEDEPEPETLKYANRSGSYALCTKAGLDALAKKF
GLTPEHFAENLRDNYQRHEVEQEAVEPQEVAKQFVCTQFPSVDEVLQAAKYMVALQIARE
PLVRKCVREVFFERAKMTVRPTKKGMKVIDETHNCYSMKYIKDKPVRDLTGDQFLKLTLA
EEENLLTITINENIEGNTSGSYIDEVKQLYIRDEFSKNVQDWNALRMGCVERALTRCVLP
DLRGELKRTLLAEAKESVLKACCRKLYNWIKIAPYSVSFPDEDEDEWDTSKGIRVMGLAY
VPDYSQSAFACIAAPDGEITDYLRLPHILKRKNSFKPDEKLMKESDLVTLRNFINMKKPH
VIAIGGESREALMIADDLKAIITDLVENEQFPQIKVEIIDNELAKVYAISNKGVSDFRDY
PELLRQAVSLARKMQDPLIEYSQLCNGDEEILSLRFHPLQEQIGKEELLEAVCLEFVNRT
NEVGVDVNLAVQQAHKSNLVQFICGLGPRKGQALLRLLKQTNQRLENRTQLVTACHMGPK
VFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGANPAG
ALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNCRYKDLRTPFRSANPE
ELFDMLTKETPETFYIGKMVTASVVGIARRKPQGEQLDHANPVRNDETRLWQCPFCLKND
FPELSDVWNHFDAGACPGQATGVKLKLDNGISGYIYIKNISDKNVANPEERVSIGQLIHC
RIMKIDVERFSVDCTSKSSDLLDKNHEWRPPRDPYYDTEQEEKDTRAENELKKNKQRQTY
IKRVIVHPAFHNISYVEAEKCMANMDQGEVIIRPSSKGADHLTITWKVADNIYQHIDVRE
EGKSNAFSLGKTLWIGGEEFEDLDEIIARHVTPMAAHARDLLYFKYYRDTNGGHKDKAEE
VVKEEKKKNPSKIHYIVSASKSCPGKFLLSYLPRNKCRHEFISVTPEGFRFRKQLFDSVA
SLFKWFKEHFRDPIPGGMTPGTPRASGRTPYQTTGTTPNFNAMNPEAIQRVAQNLPTHMM
QTLSAVANQTPHYPHTPGGAYGASNYINTPYTPSGQTPFMTPYQTPHTQQTPRYGQQTPS
PHIPPSTAPHMNGPFLHPGAATPSQRTPSYRHPPTQSPLIQSSPHPSPHARSYAGSDHGR
GYGDSSRGFPTESPRGYGSSRGYDGHRGAYSTESTDWQKAAEAWANRSKSGTPRSESRNT
PRSGGQRTPRFDDIRGDLERTRMKNVGKSPRSLRSTPRTNTSPHSMSLGDATPLYDESV
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgtcgaatcggaagctgaggaaagtgaggaggaggaattggagccccat
gagcgcaagaagctcaagaaagtcaaggctgtggatagttcggacgaggaggaggaagat
gacgacgaacgcctcagagaggaactgaaggacctgattgacgataacccgattgaggag
agtgagggcgaagactcggacgcttccgggggcgaaaaacgaaagaaatcggacgatgag
cttgacgatcggctcgaagacgaagattatgacctgattgaggagaatctgggcgtcaaa
gttgaacgaaggaaatttaagcggttgagacggattcaagatgaggaaagcgatggggag
gagcaaggggacgagagccaggacagggatgccattgccatggacctgttctcggatgat
gacgacgagaggcggtctgagcgaagccacagaccgactgctgagccagaacagttcaat
gaggaggaagaagaaggcgattattcagacgctgatgattttattgtggacgatgatgga
cgtcccattgccgagaagaagaggaaaagaaaaccgattttcacagacgcagccttgcaa
gaagcccaggagacctttggcgtcgatttcgactttgacgagttcacgaaatacgaacag
gacgactatgaagaagacgaagacgaggaagacgaatacgaagaggacgaagaaggtgaa
aggcgccgtcgtccgaagaaaaccgctcggaagaaaccgaccaaaaaatcaattttcgaa
gtctatgaaccaagcgaactcaaacgtggctttttcacggacctggataacgagattcgg
aatacggacatccccgaacggatgcaactccgggaagtccccatcacgtcagtgcctgag
gactcgaccgaactggacgtcgagtccgaatggatctacaaacaggctttttgcaaggca
actgtctcaaatatggacgctaatctgacaatggaagcccgcgaacggcagaaaaaaggc
ccacaaacaattggcaaaatccgaaaagcgcttgatttcatgcgaaaccagcagctggaa
gtcccatttattgcgttctaccgtaaagaatacgtccaaccggagctaaatatcaacgac
ttgtggaaggtgtacaaatacgacgccaagtggtgccaactcaagagccgcaaagagaac
ctcctcgccctgtttgagaaaatgcgctcgtaccaactggaccaaatcatgaaagacccc
gacgcccccattcccgagaacgtccgcttgatccgagactcggatattgagcgccttaac
agcgtccaaacggccgaagaactacaagacgtccacaaccacttcgttctttactacgcc
caggacttaccagcaatgcacgccgcctggcgagccaaagaaaaggagcgcaagaagcag
gaaaaacgcgcggcgcgtctcaaactgatcgccgagagtgaagaaggggcggaaatcccc
gaagacatggacgacgaccaagaggacgagcccgaacctgagacattaaagtacgccaat
cgctcgggttcgtacgctttgtgcaccaaagccggtctagacgcacttgccaagaaattt
ggcttgacccccgaacactttgcggagaatttacgggacaactaccagagacacgaagtg
gagcaagaggctgtcgagccacaggaagttgccaaacaatttgtgtgcacgcaatttcca
tcggttgatgaggttttgcaagctgcgaagtacatggtggcgttgcaaatcgcccgtgag
ccacttgtgcgtaaatgtgtccgagaagtgttcttcgaaagggctaaaatgacagtcagg
ccgactaaaaaagggatgaaagtcatcgacgagacgcataattgttacagtatgaagtat
atcaaggataagccggtgagggacttgaccggtgaccagttcctcaaacttacgcttgcg
gaagaagagaatctcttaactatcacgattaatgagaatattgaagggaacacgtctggg
tcgtacattgacgaagtcaagcaattgtacattagggacgagtttagtaaaaacgtgcaa
gactggaacgccttgcgtatgggctgtgtcgaacgggccttgactcgctgcgtcttgccc
gacttgaggggcgaattgaagcgaactcttctagccgaggccaaagaatcggtgcttaag
gcctgttgtcgaaaattgtacaactggattaagattgcgccgtactctgtgagcttcccg
gacgaagacgaggacgaatgggacacctccaagggcatccgcgtcatgggcctcgcctac
gtccccgactactcccagtcggccttcgcttgcatagccgcccctgacggcgaaatcacc
gactacctgcgccttccccacatcctcaagcgcaagaacagcttcaagcccgacgagaaa
ctcatgaaagagtccgacttggtcactttacgcaacttcatcaacatgaaaaaaccgcac
gtgatcgccatcgggggcgaatcgcgggaggcgctaatgatcgccgacgacctcaaagcc
atcatcaccgacctcgtcgaaaacgagcaattcccccaaattaaagtcgagataatcgac
aacgaattggccaaagtttacgccatctccaacaagggggtgtccgattttcgcgattac
cccgaactgttgcgacaggctgtctctctagcgcgcaaaatgcaagaccccttgatagaa
tactcgcaattgtgcaacggtgacgaggagattttgagtttacggttccacccgttgcag
gaacagatcggcaaggaggagctcctggaagccgtctgtcttgaattcgtcaatcggacg
aatgaagtgggcgttgatgtgaatctggccgtccaacaggcacataaatcaaacttggtg
cagtttatttgtggcctggggccgcgtaaaggccaggccttgttacgtttgttgaaacag
accaatcagaggcttgagaatcggacacaattggtcacagcgtgtcacatgggccccaaa
gtttttatcaactgttccggttttattaaaatcgatacgaacagtcttggggacagtacc
gaagcgtacgttgagattctcgatggttcacgagtgcatccggaaacgtacgagtgggcg
aggaagatggctgtggacgcgctggagtatgacgatgacgagggggcgaacccggcgggg
gcgttggaggagattttggaggcgcctgaaaggctcaaagacttggatctggacgcgttt
gccgaggaattggagagacaaggtttcggcaataaaagtatcacgttgtacgatattagg
gccgagttgaactgcagatataaggatttgaggactccgttccgctcggctaaccccgag
gaattgttcgatatgttaacgaaagaaacacccgaaactttttatattggtaaaatggtc
acagcgagtgttgtgggcattgcgcggcgaaagccacaaggggagcagctagatcatgca
aatccggtccgaaacgatgaaacgcgcctttggcagtgtcctttctgtttgaaaaacgat
tttccggaattgtccgatgtctggaaccactttgatgcgggggcttgccctggacaagcc
actggtgttaaactaaagctagataatggaatttcgggctacatttatatcaagaatata
agcgacaagaatgtggctaacccggaagaacgtgtgagtatcggtcagttgattcactgc
cggattatgaaaatcgacgtcgagcgtttttccgtcgattgcacctcgaaatcgagcgat
ttgttggataaaaaccacgagtggcggcccccacgtgacccctattacgacaccgaacag
gaagagaaggacacaagggccgaaaatgaattaaagaaaaacaagcaaagacaaacttat
atcaagcgagttattgttcaccctgcctttcataatatttcatatgttgaggcagagaaa
tgtatggcgaatatggaccaaggcgaggtgataatacgcccgtcgagtaaaggggccgac
catttaacaatcacctggaaagtggccgacaatatctaccaacacatcgacgtgagagag
gagggcaagtccaatgccttctctctgggtaagactttgtggatcggtggcgaagaattc
gaagatttggatgaaattatcgcacgacatgtcacaccaatggcggcgcacgcgcgcgat
ttgctctattttaagtactacagagacacaaacgggggtcataaggataaggcagaggag
gttgttaaagaagaaaagaagaaaaacccgtcgaaaatacactatattgtcagtgcgtcc
aaaagttgtccgggcaaatttttattgtcgtatctgccacggaataaatgccggcatgag
ttcatttcagtgacgcctgaaggtttccggttcaggaaacaattgtttgattcggtagcg
tcactgtttaagtggtttaaggaacatttccgggaccccatcccaggggggatgactccg
gggaccccacgggccagtgggcggacgccctaccagaccactgggactacacccaatttc
aatgcaatgaaccctgaggccattcaacgagtggctcaaaatttgcccacgcatatgatg
cagaccttgtcagctgtggccaatcaaacgccccattacccacacacaccaggtggcgct
tacggcgctagtaactacatcaatacgccgtatactccaagtggccaaaccccattcatg
accccttaccagaccccccacacgcagcaaacgccccgttacggccagcaaaccccttca
ccgcacatacccccaagtaccgccccccacatgaacggcccgttcctgcacccgggggcc
gcgacccccagccagcggaccccatcgtaccgacacccccctacgcagtcgcccctcatc
cagagcagtccgcacccgagcccccacgcgcgctcttatgctggtagtgaccacgggcga
ggttacggtgattcttccagaggttttccgactgagtcgccccgtgggtatggcagtagc
cgggggtatgatgggcacagaggggcgtactcgactgaatcaaccgattggcagaaagcg
gcagaggcttgggctaatagatcgaaaagcggtactccgagaagcgagtcgaggaatacg
ccgaggtcaggggggcagaggacccccaggtttgatgatattcggggggaccttgagagg
actaggatgaagaacgtggggaagagccccaggtcgttacggtcgacgccaaggaccaac
acctcgcctcattccatgtctctaggggacgccaccccgctttatgacgaaagtgtttaa
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