Tribolium castaneum (red flour beetle): 655606
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Entry
655606 CDS
T01046
Name
(RefSeq) pre-mRNA polyadenylation factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
655606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
655606
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
655606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
655606
NCBI-ProteinID:
XP_008194054
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Position
LG5:complement(14720835..14722443)
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AA seq
430 aa
AA seq
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MADDAENDDQWLYGDQPENTHEEPPADPPPVEEPPEKPEEPEPVPPPKPIDDDKPPGVDD
DEPEKESANEKEDQEDGEVQQNGEEEDLDDDSDDDVNVVIGDIKTTPSYTSLNIKRSGLL
TTTAPVDKSKQPPQPGKFSVEEFDQAGMINGVPATEYNLDSLEDKPWRKPGADITDYFNY
GFNEDTWRAYCERQKRMRMTESGVGLAAQMTSIARGTVPIMNDNSKYSGNFLGMRKAGPP
PGRRMTGSIDVIGGTAQRSTPTPIGKVEPPKMNVIQVMTADRREYSRKPTGFPDMSVPPP
NTFEDFQPEYGFNPEPEPFYGGYEPTQDSQWGAEGPNPLGPPPMHMGPPMNLPMPVPSPR
KDSPTRMDSKERDRTREDSRARSERPRDRERERSHRRERSRSRSRRHKSRSRSPSHRHRK
KKSRRHDESD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatgctgaaaacgacgatcaatggttatacggcgatcagcccgaaaatacg
cacgaagagcccccagcggacccgcccccggttgaagagccgcctgagaaacccgaagag
ccagaaccagtgcctcccccgaagcctattgacgatgacaagccaccaggagttgacgac
gatgaacccgagaaagagtctgccaacgagaaagaagaccaagaggatggagaggtgcag
caaaatggtgaagaagaggacttggacgacgacagtgacgatgacgtgaatgttgttatt
ggggatattaaaacaaccccgtcttacacttcgcttaacatcaaacggagcggtttgctg
accaccacagcccccgttgataagtccaagcagcccccacaacccggcaaatttagcgtg
gaggagttcgatcaagctggaatgataaatggggtccctgcgactgaatacaatttagat
tctttggaagataaaccgtggcggaaacctggtgctgatataactgattattttaattac
gggtttaatgaagacacatggagggcgtattgtgaaagacaaaaacgaatgagaatgact
gagtcgggagtggggttggcggcacaaatgacttcaattgcacgaggtacagttccaatt
atgaacgataacagtaaatattcaggaaatttccttggaatgcgcaaagcagggccacct
ccagggagacgtatgacggggtctattgacgtaatagggggcacagcgcaaagatccacc
cccacgcccatcggcaaggtggagccccccaaaatgaacgtcattcaggtcatgaccgct
gataggagggagtatagccggaaaccgaccggttttccagacatgtccgtaccgcccccc
aacacttttgaggatttccagcccgagtacggtttcaaccccgaaccggagcccttttat
gggggctacgaaccaacgcaggattcgcaatggggggctgaaggtcctaatccgctgggg
ccgcctccaatgcacatgggcccacccatgaacttaccaatgcctgtcccatcacctagg
aaggatagcccaactaggatggactcgaaagagcgggacaggacgagggaagacagcagg
gcgaggtctgaaaggcccagggatcgggaacgggagaggtcccacaggagggaaaggtca
agaagtaggtcgagaaggcacaagtcaaggtccaggagccccagtcataggcacaggaaa
aagaagtcaaggcgtcatgatgaaagcgattag
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