Tribolium castaneum (red flour beetle): 655638
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Entry
655638 CDS
T01046
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03030
DNA replication
tca03410
Base excision repair
tca03420
Nucleotide excision repair
tca03430
Mismatch repair
tca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
655638
03410 Base excision repair
655638
03420 Nucleotide excision repair
655638
03430 Mismatch repair
655638
03440 Homologous recombination
655638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tca03032
]
655638
03400 DNA repair and recombination proteins [BR:
tca03400
]
655638
Enzymes [BR:
tca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
655638
DNA replication proteins [BR:
tca03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
655638
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
655638
MMR (mismatch excision repair)
DNA polymerase delta complex
655638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
655638
NCBI-ProteinID:
XP_008199603
UniProt:
D6WBZ3
LinkDB
All DBs
Position
LG2:complement(557188..574205)
Genome browser
AA seq
1050 aa
AA seq
DB search
MATKRNLPPPNSSGKRFKNDKIFRPPVGDLNPTDDALIFQELELDHYISAPYPGMPGAQT
GTVPVIRMFGITKVGNSVCCHIHGFSPYFYINLPNDFTQADLSRFKEKLNEAVVSDMRSN
RDNITEAVLMVELVRGKSLVEYQGEDDNNFAKITLALPKFIAASKRLLSTTVVYQPLAHH
TFHFFEANVDIETRFMVDTNILGCCWIELPAGKWFKRPENKFPVTSRCQIEVDISWTDFI
SHSPEGEWSPVARFRIHSFDIECAGRKGIFPEPNVDPIIQIANVIKLHGDEDVVTRNIFT
LNSCAPIGHAEVRSFDTEAEMLEEWAEFVRETDPDIFTGYNINNFDFPYLIERANHLKLK
RFDYLGRILDIRSSIKETVTQTKIGKRTFKSINFEGRVAYDMLMVIKRDFKLRSYTLNSV
SQEILGEQKEDVHYSVITDLQNGDEQTRRRLAVYCLKDADLPVRILSTVRSFTNDVEMAR
VTGVPITSLLTKGEQVKVVAQLLKHARAAGYFMPTHQGAPSSEQYEGATVIEPRRGYYTD
PIATLDFSSLYPSIMIAHNLCYTTLIKPSIKEKLCLSDEQVTTTPANCMFVKSSVRPGLL
PHILQHLLAARKKTKAELKEATDPVVRAVLDGRQLAYKISANSVYGFTGAQVGKLPCLEI
SSSVTAYGRTMIEQTKQEVEQHYRIENGYESDAMVIYGDTDSVMVNFRVKSLERSMELGR
EAADLISAKFIKPIKLEFEKVYWPYLLINKKRYAGLYFTKPDKYDKMDCKGIETVRRDNC
TLVVDVINSCLRKLLIDKDPDGAVNYAKKVISDLLQNNVDISQLVITKELTKNDYAAKQA
HVELSKKMTKRDPGNAPKLGDRIPYVIIAGTKNSKAFEKAEDPIYVLENNIPIDSQYYLQ
NQLSKPLIRIFQPILGDSAESILLRGEHTRTKTMVTSRVGALSAFTKKKETCLGCRSVLP
AGYEAEAVCSHCKPKEATLYQQELGHHRMLENRFSELFTECQRCQGSLHEEILCTSRDCP
IFYIRKKVQMELDASKGKISRFGDPIMEEW
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacgcaatcttccgcctccgaattcatcagggaagaggttcaagaacgac
aaaatttttcgccccccagttggcgatttaaaccccactgatgatgcactaatttttcaa
gaattagagttggatcattacatttcagccccttatcctggaatgccaggggctcaaact
ggtactgttcctgtgattcgaatgtttggtattacaaaagtgggcaatagtgtgtgttgt
catattcatggtttttctccatacttttacattaatctgccgaatgattttacacaagcg
gatttgtcccgtttcaaggaaaagttaaatgaagctgtggtaagcgatatgcgctcaaac
cgtgacaacataaccgaagcagttttaatggtggaactggttagaggaaaatctctcgta
gagtatcaaggagaggacgacaacaactttgctaaaataaccctagccttaccgaaattt
attgctgcatctaaacgtctcctaagcactacagtcgtctatcaaccgcttgcccatcac
acgtttcatttctttgaagcaaatgtggatattgaaacgcgttttatggttgatacgaat
attttgggttgttgctggattgagttgccagcaggcaaatggttcaaacgaccagaaaat
aagttccctgtaacttcacgttgccaaatagaagtggacatctcatggactgactttatt
tcacattcaccagaaggtgaatggtcaccagtggctcgatttcgtattcatagtttcgat
attgaatgtgctggaagaaaagggatttttccggagccgaacgttgatcccattattcaa
attgccaacgtgattaagttacatggtgacgaggatgtggttactcgaaatattttcact
ttaaacagttgcgcacccataggacatgctgaggttcgtagtttcgacaccgaagcggaa
atgttggaggaatgggcggaatttgtaagagaaacagatccagacatattcaccggttac
aacataaataactttgactttccgtatctgattgaacgtgcaaatcacttgaaattaaag
cgtttcgattatttgggacgtattcttgacattaggtctagcataaaagaaacagtcacg
caaacaaaaatcggtaaaagaacattcaagtcgattaattttgaaggacgcgtagcatat
gatatgttaatggtaattaagcgcgattttaagcttcgatcatatacgttaaacagcgtt
tctcaagaaatattaggagagcagaaggaagatgtacattatagtgttattacggatttg
caaaacggcgacgaacagacaagaagaagacttgcagtgtactgtttaaaagatgcggat
ttaccagttagaatactgagtacagttcgaagttttaccaatgatgtcgaaatggcaaga
gtcaccggtgtacctataactagcttgttgacaaaaggggagcaagttaaagttgtggcc
caattattgaaacatgctcgagctgctggatatttcatgccaacacatcaaggagcacct
tcttctgaacagtatgaaggagctacagttatagaaccgagacgaggttactacactgat
ccaatagccactcttgatttcagttctctatatcccagtattatgatagcacataatttg
tgttatacgactttgattaaacccagtatcaaagaaaagctctgtttaagtgacgagcaa
gttacaaccactccagcaaattgtatgtttgtgaagtcatcggttagacccggtttgtta
ccacacatcttgcaacatcttcttgcagcgcgtaaaaaaaccaaagctgagttaaaggaa
gcaacagatcctgttgtaagagccgttttggacggtcggcaattggcttacaaaatttca
gctaactcggtttatggttttacgggagctcaagtcggaaaattgccttgtttggaaatt
tcaagtagtgtaactgcttatggtcgaacaatgattgaacagacgaaacaagaagttgaa
caacattatcgcattgaaaatggttacgaatccgatgcgatggttatttatggggacact
gactcggttatggttaacttccgagtgaagtctttagaaagaagtatggagctggggagg
gaagcagctgatttgataagtgccaagtttataaagcccatcaagttagaatttgaaaag
gtttattggccatacttattgattaataaaaagcgttatgctggattgtattttacaaaa
ccggataaatacgacaaaatggattgcaaaggtattgaaaccgtacgaagggataattgt
acattggttgttgatgtaattaattcgtgtctgcgaaaacttctgattgataaagatcca
gatggtgctgttaattacgccaaaaaagttatttcggatttgctccaaaacaatgtagat
atttctcaattggtgattacgaaagaacttacaaaaaatgattacgctgccaaacaggca
catgttgaattatcgaaaaaaatgactaaacgagatcctggaaatgctcctaaattggga
gatcgcataccttatgttataattgcaggaacgaagaattccaaagcttttgaaaaagca
gaggatcctatctacgttttggagaacaacattccaattgattcgcagtattacttgcaa
aatcaattgtctaaacctttgattcgcatttttcaaccgattttgggagacagtgctgag
tcaattttgctacggggtgaacacacacggactaaaacaatggtcacttctcgagtgggt
gctttatcagcatttactaaaaagaaagagacttgtctggggtgtcgttcggttttacca
gctggttatgaagcagaagctgtttgtagtcactgtaaaccaaaggaggcaacgttgtat
caacaggaattgggacatcacagaatgttagaaaatcgtttttcggaactttttaccgag
tgccagagatgccagggatctttgcatgaggagattttgtgcacaagtcgtgactgtcca
attttttatatacggaagaaggttcaaatggaattggatgcaagcaaagggaaaatttcg
agatttggtgatcctattatggaggaatggtga
DBGET
integrated database retrieval system
