Entry |
|
Name |
(RefSeq) DNA mismatch repair protein Msh2
|
KO |
K08735 | DNA mismatch repair protein MSH2 |
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Organism |
tca Tribolium castaneum (red flour beetle)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tca00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
655722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tca03400]
655722
DNA repair and recombination proteins [BR:tca03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
655722
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
LG10:6092355..6101271
|
AA seq |
913 aa
MSITHPAEALNLDFKQQRLFVDFFNNLPQKPSSTLRFFSHGDFYTLHSSDASSASTFTGN
IVKYMGEDPQLSYVVLRKSQFEQYVRELLLVRQYRVEVYVKSTPNKINDWTLKYKGSPGN
LSQFEDVLFENASITFSNDVLGLKVTKGRIIAAASVNSTELKFQVCEFSDNECFTELEAL
IAQVGPRECVIPQGEAPDLIELKKVLERNSVLVARAKKSDFGAENIVQDLNRLLYFAEGH
QRSCLSFPETHNSEALTCLNAVIKFLNLTGDEQNFNQFRISSLDVHRYVRLDNAALYSLN
ILPKPGVNTLESTNQTSKNFSLKGILDHCVTPQGRRLLETWIKQPLKDLNLIQERHEIVE
TFVKNPQLRQDLQTEVLARLPDLLLLSKKLSSQKATLQDCYKVYQVVAAVPLLLKNLKQV
DNPSLQSALIHPIEELRNDLDKYQDMIEELLDLELVDRGEFLVKSSFSPALEEISARKLQ
IEERMQKLLRAAANDLGFEEEKTIKLDYTDQHRYFFRVTLKEEPVLRSNSRYQILDVVKG
GVRFTNSKLAELNDDYAEAKAEYVEQQKTIISEMFAVAAGYGDCLRNLNMFIATVDVLVA
FANVAVWARVPYIRPKMFEAGQSPLKLFKVRHPCIEQQEHVSFIPNSVEFDSEHTLHIIT
GPNMCGKSTYIRSIGVCVLMAQIGSFVPCNYAEIPIVDAILARVGAEDCLLKGLSTFMVE
MIETATIIKSATPNSLVIIDELGRGTSTYDGCGLAFAIAEFLAKEIKCFSLFATHFHEIT
RLAEMHPSVCNKHVTAVTTDNTITPLYQIRDGECDNSYGIHCARMVEFSDDVIQSAVEHQ
KKLEHTAGMQFLRDFEPVLRRQVVSEGDKIIQDTLEKVKGLDKLSDEDLVKEIAKLKEEL
EGTGNLFIKGLLQ |
NT seq |
2742 nt +upstreamnt +downstreamnt
atgtcaataacacaccccgcggaagcgctaaatttagatttcaaacaacaacgcctattt
gtggactttttcaacaatttaccccagaaaccatcctccactttacgcttcttcagccat
ggcgatttctacaccctccacagctctgacgcctcatccgcgtccacttttacgggaaac
atcgtcaaatacatgggggaagacccccagctctcgtacgttgtcctccgaaagtcccaa
tttgagcaatacgtccgggagttgctcctcgtccgccaataccgcgtggaagtctacgtc
aaaagcacccccaacaagatcaacgactggacgttaaaatacaagggttcccccgggaac
ctctcccagttcgaggacgtcctcttcgagaacgcctccataaccttcagcaatgacgtc
ctgggcctcaaagtgaccaaaggccgaataatcgcagcggccagtgtgaattcaaccgaa
ttaaagttccaagtgtgtgagttcagtgataacgagtgcttcaccgaactggaggccctg
atcgcgcaagtgggccctcgcgagtgtgtcattccgcaaggggaagcccccgatttaatc
gagttgaagaaagtgttagaacgcaatagtgtgctagtggctagggcgaaaaaaagcgac
tttggggccgaaaacattgtacaggaccttaacaggctcctgtactttgccgaaggccac
caaaggagttgcctcagtttccccgaaacccacaattcggaagctctcacgtgtcttaac
gctgtgatcaagttcctgaacttgaccggagacgagcaaaactttaaccagttcaggatt
agttcgctcgatgtccaccgttacgtgcgtttggacaacgcggctctctattcactcaac
atcctccctaaaccgggggttaacacacttgagtctacaaaccaaacaagcaagaatttc
agcttgaaagggattctggaccattgtgttacccctcaaggtcgccgattgctcgaaacc
tggatcaagcaacccttgaaagacttgaacttgatccaggaacggcacgaaatcgtcgaa
acctttgtcaaaaacccacagctgagacaggacctccaaaccgaggtcttggctcgctta
cccgacctcctcctcctctccaaaaaactgtccagtcaaaaagccacgctgcaagattgc
tataaagtgtatcaagtggtcgcggctgttcccctcctcctcaaaaacctcaaacaggtt
gacaacccctccctccaatccgccctaatccacccgattgaggagttacgcaacgacctg
gacaagtatcaggacatgattgaggaactcctggatttggagctagtcgatcggggggag
ttcctggtcaagagtagttttagccccgctttggaggaaatctcagccaggaagttgcaa
attgaggaacgcatgcagaaattattgagggcggctgccaatgacttgggctttgaggag
gagaagacaatcaagttggattataccgaccaacaccggtattttttccgtgtgactctt
aaggaggagccggttttgaggtccaattcgcgttatcagattctggacgttgtcaaaggc
ggtgttagattcactaacagcaaactggccgagcttaatgacgattacgccgaggcgaaa
gccgagtacgtcgagcaacagaaaactatcatttcggagatgtttgctgtggcagccggc
tatggcgattgtttgcgcaacttgaacatgttcatagccacggttgatgttttggtggcg
tttgccaacgtggcagtgtgggcacgtgtgccgtacatacggcccaaaatgttcgaggct
ggtcaaagcccactcaagttgttcaaagtgaggcatccctgtatcgagcaacaggaacac
gtgtcgttcattcccaacagtgttgagtttgactcagagcacactttgcacatcatcaca
gggcctaacatgtgcgggaaaagcacctacattcggagtattggcgtttgtgtgttaatg
gcccagattgggtcgttcgtgccgtgcaattacgccgaaataccgatagttgacgcgatt
ctagcacgtgtgggtgctgaggattgtttattgaagggtctgagcacgtttatggtggaa
atgatcgaaacggccacgattatcaagagtgccacgccgaattcacttgttataattgac
gagttggggagggggacgtccacttatgacgggtgtggcttggcattcgctatagctgag
tttttagccaaagaaatcaagtgtttttcgttgtttgccacacattttcacgagattacg
cgtctggcggagatgcaccccagtgtgtgtaataagcacgtgaccgcggtcaccactgat
aacaccattacgcccctttatcagatcagggatggggagtgtgataacagttatgggatt
cattgtgcgcgcatggttgagttttccgatgatgtgattcagtcggccgttgagcatcag
aagaagttggaacatacggccggaatgcaatttctgagggactttgagccggttttaaga
cgccaagtcgtttcagaaggcgataaaataatccaagatactttagagaaggtgaaaggt
ttggataagttatccgatgaggatttggtcaaggaaatagcgaaactaaaggaagagctt
gaagggactggaaatttgtttattaaaggcttgcttcaataa |