KEGG   Tribolium castaneum (red flour beetle): 655722
Entry
655722            CDS       T01046                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    655722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tca03400]
    655722
DNA repair and recombination proteins [BR:tca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     655722
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 AAA_23 PKcGMP_CC
Other DBs
NCBI-GeneID: 655722
NCBI-ProteinID: XP_967374
UniProt: D7EIT9
LinkDB
Position
LG10:6092355..6101271
AA seq 913 aa
MSITHPAEALNLDFKQQRLFVDFFNNLPQKPSSTLRFFSHGDFYTLHSSDASSASTFTGN
IVKYMGEDPQLSYVVLRKSQFEQYVRELLLVRQYRVEVYVKSTPNKINDWTLKYKGSPGN
LSQFEDVLFENASITFSNDVLGLKVTKGRIIAAASVNSTELKFQVCEFSDNECFTELEAL
IAQVGPRECVIPQGEAPDLIELKKVLERNSVLVARAKKSDFGAENIVQDLNRLLYFAEGH
QRSCLSFPETHNSEALTCLNAVIKFLNLTGDEQNFNQFRISSLDVHRYVRLDNAALYSLN
ILPKPGVNTLESTNQTSKNFSLKGILDHCVTPQGRRLLETWIKQPLKDLNLIQERHEIVE
TFVKNPQLRQDLQTEVLARLPDLLLLSKKLSSQKATLQDCYKVYQVVAAVPLLLKNLKQV
DNPSLQSALIHPIEELRNDLDKYQDMIEELLDLELVDRGEFLVKSSFSPALEEISARKLQ
IEERMQKLLRAAANDLGFEEEKTIKLDYTDQHRYFFRVTLKEEPVLRSNSRYQILDVVKG
GVRFTNSKLAELNDDYAEAKAEYVEQQKTIISEMFAVAAGYGDCLRNLNMFIATVDVLVA
FANVAVWARVPYIRPKMFEAGQSPLKLFKVRHPCIEQQEHVSFIPNSVEFDSEHTLHIIT
GPNMCGKSTYIRSIGVCVLMAQIGSFVPCNYAEIPIVDAILARVGAEDCLLKGLSTFMVE
MIETATIIKSATPNSLVIIDELGRGTSTYDGCGLAFAIAEFLAKEIKCFSLFATHFHEIT
RLAEMHPSVCNKHVTAVTTDNTITPLYQIRDGECDNSYGIHCARMVEFSDDVIQSAVEHQ
KKLEHTAGMQFLRDFEPVLRRQVVSEGDKIIQDTLEKVKGLDKLSDEDLVKEIAKLKEEL
EGTGNLFIKGLLQ
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgtcaataacacaccccgcggaagcgctaaatttagatttcaaacaacaacgcctattt
gtggactttttcaacaatttaccccagaaaccatcctccactttacgcttcttcagccat
ggcgatttctacaccctccacagctctgacgcctcatccgcgtccacttttacgggaaac
atcgtcaaatacatgggggaagacccccagctctcgtacgttgtcctccgaaagtcccaa
tttgagcaatacgtccgggagttgctcctcgtccgccaataccgcgtggaagtctacgtc
aaaagcacccccaacaagatcaacgactggacgttaaaatacaagggttcccccgggaac
ctctcccagttcgaggacgtcctcttcgagaacgcctccataaccttcagcaatgacgtc
ctgggcctcaaagtgaccaaaggccgaataatcgcagcggccagtgtgaattcaaccgaa
ttaaagttccaagtgtgtgagttcagtgataacgagtgcttcaccgaactggaggccctg
atcgcgcaagtgggccctcgcgagtgtgtcattccgcaaggggaagcccccgatttaatc
gagttgaagaaagtgttagaacgcaatagtgtgctagtggctagggcgaaaaaaagcgac
tttggggccgaaaacattgtacaggaccttaacaggctcctgtactttgccgaaggccac
caaaggagttgcctcagtttccccgaaacccacaattcggaagctctcacgtgtcttaac
gctgtgatcaagttcctgaacttgaccggagacgagcaaaactttaaccagttcaggatt
agttcgctcgatgtccaccgttacgtgcgtttggacaacgcggctctctattcactcaac
atcctccctaaaccgggggttaacacacttgagtctacaaaccaaacaagcaagaatttc
agcttgaaagggattctggaccattgtgttacccctcaaggtcgccgattgctcgaaacc
tggatcaagcaacccttgaaagacttgaacttgatccaggaacggcacgaaatcgtcgaa
acctttgtcaaaaacccacagctgagacaggacctccaaaccgaggtcttggctcgctta
cccgacctcctcctcctctccaaaaaactgtccagtcaaaaagccacgctgcaagattgc
tataaagtgtatcaagtggtcgcggctgttcccctcctcctcaaaaacctcaaacaggtt
gacaacccctccctccaatccgccctaatccacccgattgaggagttacgcaacgacctg
gacaagtatcaggacatgattgaggaactcctggatttggagctagtcgatcggggggag
ttcctggtcaagagtagttttagccccgctttggaggaaatctcagccaggaagttgcaa
attgaggaacgcatgcagaaattattgagggcggctgccaatgacttgggctttgaggag
gagaagacaatcaagttggattataccgaccaacaccggtattttttccgtgtgactctt
aaggaggagccggttttgaggtccaattcgcgttatcagattctggacgttgtcaaaggc
ggtgttagattcactaacagcaaactggccgagcttaatgacgattacgccgaggcgaaa
gccgagtacgtcgagcaacagaaaactatcatttcggagatgtttgctgtggcagccggc
tatggcgattgtttgcgcaacttgaacatgttcatagccacggttgatgttttggtggcg
tttgccaacgtggcagtgtgggcacgtgtgccgtacatacggcccaaaatgttcgaggct
ggtcaaagcccactcaagttgttcaaagtgaggcatccctgtatcgagcaacaggaacac
gtgtcgttcattcccaacagtgttgagtttgactcagagcacactttgcacatcatcaca
gggcctaacatgtgcgggaaaagcacctacattcggagtattggcgtttgtgtgttaatg
gcccagattgggtcgttcgtgccgtgcaattacgccgaaataccgatagttgacgcgatt
ctagcacgtgtgggtgctgaggattgtttattgaagggtctgagcacgtttatggtggaa
atgatcgaaacggccacgattatcaagagtgccacgccgaattcacttgttataattgac
gagttggggagggggacgtccacttatgacgggtgtggcttggcattcgctatagctgag
tttttagccaaagaaatcaagtgtttttcgttgtttgccacacattttcacgagattacg
cgtctggcggagatgcaccccagtgtgtgtaataagcacgtgaccgcggtcaccactgat
aacaccattacgcccctttatcagatcagggatggggagtgtgataacagttatgggatt
cattgtgcgcgcatggttgagttttccgatgatgtgattcagtcggccgttgagcatcag
aagaagttggaacatacggccggaatgcaatttctgagggactttgagccggttttaaga
cgccaagtcgtttcagaaggcgataaaataatccaagatactttagagaaggtgaaaggt
ttggataagttatccgatgaggatttggtcaaggaaatagcgaaactaaaggaagagctt
gaagggactggaaatttgtttattaaaggcttgcttcaataa

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