Tribolium castaneum (red flour beetle): 655772 Help Entry 655772            CDS       T01046                                  Symbol hif1a, sima, similar Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism tca  Tribolium castaneum (red flour beetle) Pathway tca04137   Mitophagy - animal tca04140   Autophagy - animal tca04148   Efferocytosis Brite KEGG Orthology (KO) [BR:tca00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     655772 (hif1a)    04137 Mitophagy - animal     655772 (hif1a)    04148 Efferocytosis     655772 (hif1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:tca03000]     655772 (hif1a) Transcription factors [BR:tca03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     655772 (hif1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  bHLH_HIF1A PAS_11 PAS_3 PAS PAS_9 HIF-1a_CTAD PAS_4 HLH PAS_2 Motif Other DBs NCBI-GeneID:  655772 NCBI-ProteinID:  XP_015835862 LinkDB All DBs Position LG5:complement(11622592..11650381) Genome browser AA seq 895 aa AA seqDB search MKNFSTFNVTNRQLTKMECSTFPQDGVAVQQTSQMSPYLGNVNCATSYGLNNATLEPIPN RHNSRIRPNGLLARMALPCQSSSNWDYTECYSYYADGCYNTCQFVEFGDIEDFMNNEKRK EKSRDAARSRRSKETEVFTDLGNALPISQEQVSQLDKASVMRLAIAYLRVRDMITLVPEA PEPDDHKILTDESIFLKALEGFLLVMSSEGDIVYMSENVSEYLGITQIDLMGQNIFEYSH PCDHDEIKEILSTKTREETETPKSFFIRLKCTLTSKGRSVNLKSATYKVIHCTGHIVQTE DDGNEENAKGTLRRCLVAIGQPIPHPSNIEAPLPRQTFLTKHSLDMKFTHADDKIMMDVL GYDSEDLVGKSVYDYHHAMDSDAICSAFKCLFSKGQCETNRYRFLAKTGGYVWVLTQATL INDNKTMKPQSVVCVNYVISGVECKDEIYSSSQLASVKTENLCNNENLPVLVEKVTPEAT PAKKPELNNAKKVISSYVDNSTKPPLTATSKIFAPRTKEMNKGFLMFSDEEPGLTMLKDE PDDLTHLAPVAGDVCVPLDDHPFLTDKMLDDFLLRDNFEPLLTDEPTDPFISYRDSYDNS PQLLSPNLSKNSECSLPSLNSPSDSLSDEDRLSTFMNLHTEDESDLVAKAPYITMNMGDD LPLLMSDDLMWSSSEKSRASPDSSSSLAQLLCSSINKHSRPNDHGGGLISPDRLMDVDEY YNKKNSAMNGKSSSISSRLERTNKRSNTSNYESNTKRSRNEPKEKMSSELLQQLMSTNHH RGRPKGKSNWLLDSGGQKAACISQPSDSVLMNLLDDPMDRTSVKRDKGRPPGPPDDARAR QNTIRKNSLSLLDPDATIPSLLDLTQQDFEVNAPVNSLLLQGTDLLTALDINGPI NT seq 2688 nt NT seq  +upstreamnt  +downstreamnt atgaaaaatttctccacttttaacgtcactaatcgacagttaactaaaatggagtgtagt acttttccacaagacggtgtcgcggttcaacaaacttcacaaatgagcccttacttggga aatgtgaattgtgcgaccagttatggattaaataatgcaacccttgaaccgattccaaat cgacataacagtcggattagacctaatggtctcctggctcgcatggccttaccgtgccag tcgtcctccaattgggattatacagagtgttatagttattatgcagatgggtgctataac acttgccagtttgttgaatttggtgatattgaagacttcatgaataatgagaaacgtaag gaaaaatccagagatgcggcgcgatctcgtcgctccaaagaaaccgaagtttttaccgac ttgggtaacgctctgccaatttcacaagaacaggtttcgcaattggataaagcttccgtt atgagattggccattgcatatctgcgggtgcgggatatgatcactttggtcccggaagcc ccggagcccgacgaccacaaaattttaaccgatgaatcaattttcttgaaagcattagag gggtttttactggtgatgtcttcagagggagacattgtttacatgtctgagaatgtcagc gagtatcttggaattacacagattgatctgatgggtcagaatatttttgagtacagtcat ccgtgcgatcatgacgaaatcaaggaaattttatcaacaaagacccgggaagaaacagag acgcctaagtcgttttttatcaggcttaagtgtactcttacaagcaaaggccgatcggtc aatctcaaatcagcgacttacaaggtcatccattgcactggtcacatagtgcaaactgaa gatgacggaaatgaagaaaatgcgaaaggaactttgcgccgatgtcttgtggcaatagga caacctattccgcatccttccaacatcgaagccccattaccacgtcaaacattcttaaca aaacacagtttggatatgaaatttacgcacgctgacgataaaataatgatggatgttttg ggatacgattcggaagatttggtcgggaaatcggtttatgactatcaccatgccatggat agtgacgcgatttgttcagctttcaagtgtttattttccaaaggacagtgtgagaccaat cggtaccgtttccttgcaaaaactgggggctacgtctgggtcctcacccaagccacgttg atcaacgacaacaagaccatgaagccccaaagtgtcgtttgcgtgaactacgtcataagt ggtgtcgaatgtaaagatgagatttactcgtcgtcgcaattggcgtcggtaaaaacagaa aatttgtgcaataacgagaatttacccgtacttgtggagaaagtgactccggaggcgact ccggcgaaaaagcccgagcttaataacgccaagaaagtgatttcttcctacgtggataac agcacgaagccaccgcttacggcgacttcgaaaattttcgccccgaggactaaagagatg aacaagggattcctgatgttctccgatgaggagccgggactcacgatgttgaaggacgag cctgacgatttgacgcatttggctccagtagccggcgacgtttgcgttcctctagacgat cacccctttttaaccgacaagatgttggacgatttcttgctcagagataattttgagccg ctgcttaccgacgaacccaccgaccctttcatttcgtacagagattcctacgataattct ccccaattattatctccgaatctctcaaagaattcggagtgtagtttaccttcgttaaat agtccgagcgattctctaagcgacgaggatcgtttgtcaacgttcatgaatttgcacaca gaggacgagtcggatttggtggcgaaagccccctatatcacgatgaacatgggcgacgat ctgcccctgctgatgtcagacgatctcatgtggagcagcagcgaaaagtcgagagcttcg cccgacagtagctcgagtctggcacagttgttgtgctcttcgataaacaaacactcgcgt ccgaacgatcacggcggagggttgatttcgccggatcggctcatggacgtggacgaatat tacaacaagaaaaattcagcaatgaacggaaagtcgtcgtcgatatcgtcccggttagag cgaacaaacaaaagatcgaacacttcaaattacgagtcaaacacaaagcggtcgcgaaac gagcctaaagagaaaatgtcttcagagcttttgcagcagttaatgtcaaccaaccaccac cggggccgcccgaagggcaagagcaactggttgctcgactcgggcggccagaaggcggct tgcataagccagccgagtgacagtgtcttgatgaaccttctggatgatcccatggaccgg acgtccgtgaaaagggacaaggggcggcccccgggcccccctgacgacgccagggcgcgc cagaacacgatacggaagaattccctgtcgctgctcgatcccgacgcgaccataccgtca ttactcgatttgacgcaacaggatttcgaagtgaacgcacctgtgaatagcctcctcctg caaggcaccgatctgctgacggcgcttgacatcaacgggcccatttag

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