Tribolium castaneum (red flour beetle): 656215
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Entry
656215 CDS
T01046
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
656215
09122 Translation
03013 Nucleocytoplasmic transport
656215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
656215
03041 Spliceosome [BR:
tca03041
]
656215
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
656215
Spliceosome [BR:
tca03041
]
Complex C
Other components
EJC/TREX
656215
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
656215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_NOL10_N
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_EML
DSE1_N
RMC1_N
Beta-prop_WDR35_TULP_N
PAC11
WDR90_beta-prop_4th
B-prop_COPA_B_2nd
CFAP251_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
WD40_RFWD3
TRM82_WD
Beta-prop_DCAF12
Beta-prop_ELP1_1st
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
DPPIV_N
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
656215
NCBI-ProteinID:
XP_008199514
UniProt:
D6WIR9
LinkDB
All DBs
Position
LG3:complement(11334387..11335936)
Genome browser
AA seq
320 aa
AA seq
DB search
MYQDKIEELQNYFKSHCKIKEYSGHSSKVHSVGWSCDGKRLASGSFDKSVCIYTLDRDRL
NKEITFKGHGGSVDQLCWHQSHPDLLSTASGDKSVRIWDTRVQKCVATINTKGENINITW
SPNGNAIAVGNKEDLVTFIDARTHKIEAEEQFNFEVNEISWNNTSDLFFLTNGQGCVHIL
SYPELKRQHILKAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACQRVFTRMDWPV
RTISFSYDGQLLASASEDLIIDIGFVETGDKIADISVEAATFTVAWHPSMYFLAYACDDK
DAYDRKRDAGSLKVWGFPSD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagacaaaattgaggagctccaaaactactttaagagccactgtaaaataaaa
gagtattcggggcactcttccaaagtccattctgttggttggagttgcgatggtaaacgt
ctggcatctggttctttcgataaatccgtctgtatctacactttggacagagatcgtttg
aataaggaaataacattcaagggacacggtggttcagtggaccaactctgttggcaccag
tctcacccagacttattaagtacagcaagtggtgataagtctgttagaatttgggacact
cgagtccagaaatgtgttgccacaatcaatacaaaaggggagaatatcaacattacgtgg
tcgcctaacggcaacgcgatcgcagtcgggaacaaggaagacttggtcacttttatcgac
gccaggacgcacaaaatcgaagctgaagaacagttcaattttgaagtgaacgaaatttca
tggaataacacaagcgacttgttctttctaacgaacggacaaggctgtgtccacattttg
agctatcccgaactgaagaggcaacacattttgaaggcgcatccagggacttgtatttgt
atagagtttgaccctacggggaaatactttgcaacgggtagtgccgatgctttggtttcc
ttgtgggatattaacgagttggcgtgtcagagagtgtttacaagaatggattggcccgtg
aggacgatttcgtttagttacgatggtcagttgctagcttcagcttcagaagatttaatc
atagatattggatttgttgaaactggtgataagattgcggatatttcggtagaagcggct
acttttacggtagcttggcacccctcaatgtactttttggcgtacgcttgtgacgataag
gatgcatatgataggaaacgggacgctgggagtttgaaagtttgggggtttccgtctgac
tga
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integrated database retrieval system