KEGG   Tribolium castaneum (red flour beetle): 656215
Entry
656215            CDS       T01046                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03013  Nucleocytoplasmic transport
tca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    656215
  09122 Translation
   03013 Nucleocytoplasmic transport
    656215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    656215
   03041 Spliceosome [BR:tca03041]
    656215
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     656215
Spliceosome [BR:tca03041]
 Complex C
  Other components
   EJC/TREX
    656215
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    656215
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_NOL10_N Tricorn_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_EML DSE1_N RMC1_N Beta-prop_WDR35_TULP_N PAC11 WDR90_beta-prop_4th B-prop_COPA_B_2nd CFAP251_N Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 WD40_RFWD3 TRM82_WD Beta-prop_DCAF12 Beta-prop_ELP1_1st Beta-prop_SCAP Cytochrom_D1 Beta-prop_Nup120_160 Beta-prop_WDR11_1st DPPIV_N Rav1p_C
Other DBs
NCBI-GeneID: 656215
NCBI-ProteinID: XP_008199514
UniProt: D6WIR9
LinkDB
Position
LG3:complement(11334387..11335936)
AA seq 320 aa
MYQDKIEELQNYFKSHCKIKEYSGHSSKVHSVGWSCDGKRLASGSFDKSVCIYTLDRDRL
NKEITFKGHGGSVDQLCWHQSHPDLLSTASGDKSVRIWDTRVQKCVATINTKGENINITW
SPNGNAIAVGNKEDLVTFIDARTHKIEAEEQFNFEVNEISWNNTSDLFFLTNGQGCVHIL
SYPELKRQHILKAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACQRVFTRMDWPV
RTISFSYDGQLLASASEDLIIDIGFVETGDKIADISVEAATFTVAWHPSMYFLAYACDDK
DAYDRKRDAGSLKVWGFPSD
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtatcaagacaaaattgaggagctccaaaactactttaagagccactgtaaaataaaa
gagtattcggggcactcttccaaagtccattctgttggttggagttgcgatggtaaacgt
ctggcatctggttctttcgataaatccgtctgtatctacactttggacagagatcgtttg
aataaggaaataacattcaagggacacggtggttcagtggaccaactctgttggcaccag
tctcacccagacttattaagtacagcaagtggtgataagtctgttagaatttgggacact
cgagtccagaaatgtgttgccacaatcaatacaaaaggggagaatatcaacattacgtgg
tcgcctaacggcaacgcgatcgcagtcgggaacaaggaagacttggtcacttttatcgac
gccaggacgcacaaaatcgaagctgaagaacagttcaattttgaagtgaacgaaatttca
tggaataacacaagcgacttgttctttctaacgaacggacaaggctgtgtccacattttg
agctatcccgaactgaagaggcaacacattttgaaggcgcatccagggacttgtatttgt
atagagtttgaccctacggggaaatactttgcaacgggtagtgccgatgctttggtttcc
ttgtgggatattaacgagttggcgtgtcagagagtgtttacaagaatggattggcccgtg
aggacgatttcgtttagttacgatggtcagttgctagcttcagcttcagaagatttaatc
atagatattggatttgttgaaactggtgataagattgcggatatttcggtagaagcggct
acttttacggtagcttggcacccctcaatgtactttttggcgtacgcttgtgacgataag
gatgcatatgataggaaacgggacgctgggagtttgaaagtttgggggtttccgtctgac
tga

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