Tribolium castaneum (red flour beetle): 656317
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Entry
656317 CDS
T01046
Symbol
RfC40
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03030
DNA replication
tca03410
Base excision repair
tca03420
Nucleotide excision repair
tca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
656317 (RfC40)
03410 Base excision repair
656317 (RfC40)
03420 Nucleotide excision repair
656317 (RfC40)
03430 Mismatch repair
656317 (RfC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tca03032
]
656317 (RfC40)
03036 Chromosome and associated proteins [BR:
tca03036
]
656317 (RfC40)
03400 DNA repair and recombination proteins [BR:
tca03400
]
656317 (RfC40)
DNA replication proteins [BR:
tca03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
656317 (RfC40)
DNA Replication Termination Factors
ELG1-RFC complex
656317 (RfC40)
Chromosome and associated proteins [BR:
tca03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
656317 (RfC40)
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
656317 (RfC40)
Check point factors
HRAD17(Rad24)-RFC complex
656317 (RfC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
Rad17
RCF1-5-like_lid
Mg_chelatase
AAA_assoc_2
AAA_22
AAA_16
RuvB_N
AAA_24
Viral_helicase1
AAA_19
AAA_11
nSTAND3
AAA_5
DNAX_ATPase_lid
NTPase_1
AAA_18
ABC_tran
AAA_3
MeaB
AAA_2
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
656317
NCBI-ProteinID:
XP_967947
LinkDB
All DBs
Position
Un
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AA seq
347 aa
AA seq
DB search
METMEVEEAPQAGPSAEPGQGPLQKADNLPWIEKYRPQTFQEIVGNEDTTNRLSVIAKQG
NLPNLIIAGPPGVGKTTTILCLARILLGPAFKDAVLELNASNDRGIDVVRNKIKMFAQQK
VTLPPGRHKIIILDEVDSMTEGAQQALRRTMEIYSNTTRFALACNYSEKVIEAIQSRCAI
LRYSRLTDAQVLARVIQVCQQESVEYTQDGLEAIVFTAQGDMRQALNNLQSTFNGFGVVN
STNVLKVCDEPHPMLIKDMLNSCVTGDVRKAFKIVDHLWSLGYAAEDIIKNIFKVCKNMD
MEESLKLAFIKQIGVTHMRIVDGLCSLVQMSGLISRLCMEAKGVKGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagacaatggaagtagaagaagccccacaggcgggcccttcggccgaacccggccaa
ggcccgttacaaaaagccgataacctcccttggatcgaaaaataccgcccccagactttc
caagaaatcgtaggcaatgaagacaccaccaatcgcctgtcagtcatcgccaaacagggc
aacctccccaatttaatcattgccgggcctcctggcgtgggcaaaaccaccacaatcctg
tgcctggcccgaatccttttaggcccagcgtttaaagacgctgttctcgaactcaacgcg
tcaaacgacagaggtatagacgttgtccgtaacaaaatcaaaatgtttgcgcaacaaaaa
gtcactctcccgcctggacgccacaaaatcattatcttggacgaggtggacagtatgacc
gaaggggcgcaacaagccctaagacgcacgatggaaatttacagtaatacgactcggttc
gctttggcttgtaactacagtgaaaaagtgatagaagcgattcagtcacggtgtgctatt
ttgcggtactcccgcttaacggatgcccaagtgttggcaagggtgatacaagtgtgccaa
caggagagtgttgaatatacgcaggatgggcttgaggcgattgtgttcacagctcagggg
gatatgagacaagcgttgaataatttacagtcgacttttaacggctttggggttgttaat
tccactaatgtgctgaaagtgtgcgatgagccccatcctatgttaattaaagatatgctc
aacagttgtgttactggtgatgtaaggaaggcgttcaagattgttgatcatttgtggagt
ttggggtacgctgccgaggatattattaagaatattttcaaggtttgcaaaaatatggac
atggaggagagtttgaaacttgcttttattaaacaaattggggtcacacatatgaggatt
gttgatggtttgtgctctttggtgcaaatgtcgggacttatatcgagattatgtatggaa
gctaaaggagtgaagggtgaatga
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