KEGG   Tribolium castaneum (red flour beetle): 656317
Entry
656317            CDS       T01046                                 
Symbol
RfC40
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03030  DNA replication
tca03410  Base excision repair
tca03420  Nucleotide excision repair
tca03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    656317 (RfC40)
   03410 Base excision repair
    656317 (RfC40)
   03420 Nucleotide excision repair
    656317 (RfC40)
   03430 Mismatch repair
    656317 (RfC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tca03032]
    656317 (RfC40)
   03036 Chromosome and associated proteins [BR:tca03036]
    656317 (RfC40)
   03400 DNA repair and recombination proteins [BR:tca03400]
    656317 (RfC40)
DNA replication proteins [BR:tca03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    656317 (RfC40)
  DNA Replication Termination Factors
   ELG1-RFC complex
    656317 (RfC40)
Chromosome and associated proteins [BR:tca03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    656317 (RfC40)
DNA repair and recombination proteins [BR:tca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     656317 (RfC40)
  Check point factors
   HRAD17(Rad24)-RFC complex
    656317 (RfC40)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 Rad17 RCF1-5-like_lid Mg_chelatase AAA_assoc_2 AAA_22 AAA_16 RuvB_N AAA_24 Viral_helicase1 AAA_19 AAA_11 nSTAND3 AAA_5 DNAX_ATPase_lid NTPase_1 AAA_18 ABC_tran AAA_3 MeaB AAA_2 AAA_25 AAA_29
Other DBs
NCBI-GeneID: 656317
NCBI-ProteinID: XP_967947
LinkDB
Position
Un
AA seq 347 aa
METMEVEEAPQAGPSAEPGQGPLQKADNLPWIEKYRPQTFQEIVGNEDTTNRLSVIAKQG
NLPNLIIAGPPGVGKTTTILCLARILLGPAFKDAVLELNASNDRGIDVVRNKIKMFAQQK
VTLPPGRHKIIILDEVDSMTEGAQQALRRTMEIYSNTTRFALACNYSEKVIEAIQSRCAI
LRYSRLTDAQVLARVIQVCQQESVEYTQDGLEAIVFTAQGDMRQALNNLQSTFNGFGVVN
STNVLKVCDEPHPMLIKDMLNSCVTGDVRKAFKIVDHLWSLGYAAEDIIKNIFKVCKNMD
MEESLKLAFIKQIGVTHMRIVDGLCSLVQMSGLISRLCMEAKGVKGE
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggagacaatggaagtagaagaagccccacaggcgggcccttcggccgaacccggccaa
ggcccgttacaaaaagccgataacctcccttggatcgaaaaataccgcccccagactttc
caagaaatcgtaggcaatgaagacaccaccaatcgcctgtcagtcatcgccaaacagggc
aacctccccaatttaatcattgccgggcctcctggcgtgggcaaaaccaccacaatcctg
tgcctggcccgaatccttttaggcccagcgtttaaagacgctgttctcgaactcaacgcg
tcaaacgacagaggtatagacgttgtccgtaacaaaatcaaaatgtttgcgcaacaaaaa
gtcactctcccgcctggacgccacaaaatcattatcttggacgaggtggacagtatgacc
gaaggggcgcaacaagccctaagacgcacgatggaaatttacagtaatacgactcggttc
gctttggcttgtaactacagtgaaaaagtgatagaagcgattcagtcacggtgtgctatt
ttgcggtactcccgcttaacggatgcccaagtgttggcaagggtgatacaagtgtgccaa
caggagagtgttgaatatacgcaggatgggcttgaggcgattgtgttcacagctcagggg
gatatgagacaagcgttgaataatttacagtcgacttttaacggctttggggttgttaat
tccactaatgtgctgaaagtgtgcgatgagccccatcctatgttaattaaagatatgctc
aacagttgtgttactggtgatgtaaggaaggcgttcaagattgttgatcatttgtggagt
ttggggtacgctgccgaggatattattaagaatattttcaaggtttgcaaaaatatggac
atggaggagagtttgaaacttgcttttattaaacaaattggggtcacacatatgaggatt
gttgatggtttgtgctctttggtgcaaatgtcgggacttatatcgagattatgtatggaa
gctaaaggagtgaagggtgaatga

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