Tribolium castaneum (red flour beetle): 656462 Help Entry 656462            CDS       T01046                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism tca  Tribolium castaneum (red flour beetle) Pathway tca03040   Spliceosome Brite KEGG Orthology (KO) [BR:tca00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     656462  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tca03019]     656462    03041 Spliceosome [BR:tca03041]     656462 Messenger RNA biogenesis [BR:tca03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      656462 Spliceosome [BR:tca03041]  Complex B   Other components    Prp19-related factors     656462  Complex C     656462 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_8 TPR_2 TPR_12 TPR_15 ARM_TT21_C TPR_10 DHR-2_Lobe_A ARM_TT21 NRDE-2 PPR Tcf25 TRPM_tetra LTN1_E3_ligase_6th Motif Other DBs NCBI-GeneID:  656462 NCBI-ProteinID:  XP_968085 UniProt:  A0A139WHY2 LinkDB All DBs Position LG5:1368355..1389670 Genome browser AA seq 857 aa AA seqDB search MPVSSDVVRKETPMEIIFTDEDLPYEEEILRNPYSVKHWLRYIEHKKKAPKHGVNIIYER ALKELPGSYKLWYNYLRTRRLQVKNRCITDPAFEEVNNAFERSLVFMHKMPRIWMDYCSF LTDQCKITRTRKVFDRALRALPVTQHHRIWPLYLTFVKKHDISETAVRIFRRYLKLSPEN AEEYVEYLTEVGRLDEAAVVLAKIVNDENFVSQHGKSKHQLWNELCELISKNPEEVHSLN VDAIIRGGLRRYTDQLGHLWNSLATYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAY AQFEELTLSKRMEEVAQKPNQTEDDDIELELRLARFENLMERRLLLLNSVLLRQNPHNVQ EWHKRVQLYEGKPHEIINTYTEAVQTVDPKLAVGKLHTLWVEFAKFYETNKQIEDARLIF EKATQVAYVKVDDLATVWCEWAEMEIRNENYEQALKLMHRASTMPSRKVAYHDDTETVQA RLYKSLKVWSMLADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGLFLEENNYFEEAF RAYEKGISLFKWPNVYDIWNTYLSKFLKRYGGSKLERARDLFEQCLENCPPQFAKPLYLL YAKLEEEHGMARHAMAVYERATNAVPQEEMFEIFNIYIKRAAEIYGIPKTRQIYEKAIEV LPEDKTREMCVRFADMETKLGEIDRARAIYSHCSQICDPRVTTEFWQIWKEFEVRHGNED TMREMLRIKRSIQAMYNTQINMMSAQMLSSASSVAGTVADLAPGVKDGMRLLEAKAAEMA GTSSGVRPGNIMFVRGETQGDNKDKVVNPDEIDIGDDDDEEENEDEGEDVPVEKQSIPSE VFGGLKKKDDQGEQDEG NT seq 2574 nt NT seq  +upstreamnt  +downstreamnt atgcctgtctctagcgatgttgttcgtaaagaaacccccatggaaattatatttacagac gaagacctcccttacgaagaagagatcctccgcaacccctactctgtgaagcactggctg cgctacattgagcacaagaagaaggccccgaagcacggcgttaacataatttacgagcgg gcccttaaagagctccccggctcttacaaactttggtacaactacttacgcactcgccgc ctccaggtgaaaaaccgctgcatcacagaccccgcattcgaggaagtcaacaacgctttt gagcgctcccttgttttcatgcacaaaatgccgcgaatttggatggattattgcagtttc ctgaccgatcagtgcaagataacgcggactcggaaggttttcgaccgggctttgagggcg ctcccggtgacccaacaccaccggatttggcccctttacctcacattcgtcaaaaagcac gacatttccgagaccgctgtgcgcatttttcgccggtatttgaagctcagtccggagaat gcggaggaatacgttgagtatttgaccgaagttgggcgtttggacgaagccgccgttgtg ttggctaagattgtcaatgatgagaatttcgtgtcacagcacgggaagtccaaacaccag ctctggaacgagttgtgcgagttgatttcgaaaaatcccgaagaggtgcattcgttgaat gttgatgcgattatcaggggcggcttgaggcggtacactgatcagttggggcatttgtgg aactctctggctacgtattatgtcaggagcgggttgtttgaacgggcgcgggatatttac gaggaggcgattcagacggttacaactgtgcgggattttacgcaagtctttgacgcctat gcacagtttgaggagttgacgttgagtaaacggatggaggaggtggcgcaaaagcccaat cagactgaagatgatgatattgagttggagttgaggctggcgaggtttgagaatttgatg gagaggaggctgttgctgttgaattcggttctcttgaggcagaatccgcataatgtgcag gagtggcacaagcgagtgcagctgtatgaaggaaaaccacacgaaatcatcaacacctac accgaggcggtgcaaaccgtcgaccccaaactcgccgtaggcaaactgcacaccctctgg gtcgaattcgccaaattctacgaaaccaacaaacaaatcgaggacgctcgtctcattttc gagaaagccactcaagtggcgtacgtgaaagtggacgatttggcgacggtttggtgcgaa tgggccgaaatggagatacgaaacgaaaactacgagcaagccctcaaactcatgcacaga gctagcaccatgccatcacgcaaagtggcctatcatgacgacaccgagaccgtgcaagcc agactgtacaagtcgctgaaagtctggtcgatgttggccgacttggaggagagtttcggg acgtttaagtcatgcaaagcggtctacgacaggattattgacttgaaaattgcaaccccg cagattattatcaattacgggttgttcctagaggagaataattattttgaggaggcgttc cgggcctatgagaaggggatttcgctgttcaagtggccgaacgtttacgacatttggaac acgtacttgagcaagttcttgaagcgttatggggggagcaagttggagagggcgcgcgat ttgttcgagcagtgtttggagaactgtcctccacaattcgccaaacccctctacctcctt tacgcgaagttggaggaggagcacggaatggcccgacacgccatggctgtgtacgaaagg gccacaaacgctgtccctcaggaggaaatgttcgaaatattcaacatttacatcaaaagg gcggccgaaatttacgggattcccaaaacgcgccagatttacgagaaagcgattgaggtc cttccggaggacaaaactcgggagatgtgcgtccgtttcgccgatatggagacgaagttg ggcgagatcgaccgagctcgcgccatctactcgcactgtagccagatttgcgacccgagg gtcacgactgagttctggcagatctggaaggagtttgaggtgaggcacgggaatgaggac acgatgagagagatgttgaggatcaagaggagtatccaagcgatgtacaacactcagatt aatatgatgtcggctcagatgctgagttcggcgagttccgtggcggggactgttgctgat ctggcgccgggggttaaggatgggatgcggttgcttgaggcgaaggcggcggaaatggca gggacgtcgagtggggtccggcctgggaatattatgtttgtgaggggagagacgcaaggg gataataaggataaggttgttaatccggatgagattgatattggggatgatgacgacgag gaggagaatgaggacgaaggggaggatgtgccggttgagaagcagagtattccgtcggaa gtgtttggtgggttgaagaagaaggatgatcagggggaacaggatgagggatga

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