KEGG   Tribolium castaneum (red flour beetle): 656518
Entry
656518            CDS       T01046                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    656518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    656518
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     656518
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WDR55 CSTF1_dimer Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C WDR90_beta-prop_4th Ge1_WD40 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F eIF2A Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_ELP1_1st Beta-prop_WDR11_1st VPS8_N
Other DBs
NCBI-GeneID: 656518
NCBI-ProteinID: XP_008194232
LinkDB
Position
LG5:complement(12339547..12341246)
AA seq 438 aa
MTNSSIKDEDVDTTNLLKSREFLYRLIISQLFYDGHQSIGTNLTAAVQADPPCAPSDRLF
HIVMAGLEHEPDRKERXPKTPGIGNNNIGPGLDLEFETESNIPAPEPALYETAYVTSHKG
NCRAGCFSSDGQLIATGSVDASIKILDVDRMLAKSAPDEMDPSRGEQQGHPVIRTLYDHM
EEVTCLEFHPKEPILVSGSKDNTIKMFDISKASVKKAFKTISESEPIRAMSFHPGGDHMI
VATNHPVVRLYDVNTLQCYVCAFPSHQHTQSVTCLKWSQDARVFATCSKDGNIKLWDAVS
NRCINTFQKAHDGLEVCSVVFSKNGKYLLSSGKNSICKLWELTTSRCLIAYTGAGTTGKQ
EYEAQAVFNHTEDYVLFPDEATTSLCAWNSRNASRKQLMSLGHNGAVRLIAHSPTQAAFL
TCSDDFRARFWYRRTPTL
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgactaactcaagcattaaggacgaagacgtggacacgacgaacctcctcaagagtcgc
gagttcctctaccgcctcattattagccaactcttctatgacggccaccaaagcatcggc
actaatctcacggccgcagtccaagcggaccctccgtgtgcccccagtgaccgtcttttt
catattgtcatggccgggttagaacatgagcctgaccgtaaggagagannccccaaaacc
cccggcatagggaacaataatatcggtccggggcttgatctcgaatttgagactgagtca
aatatcccagcgcccgaacccgcattgtatgaaactgcgtacgtgacgtcacataaaggg
aattgtcgtgctgggtgtttttcaagtgatgggcaattaattgcaacagggagtgtggac
gctagtattaagattctggatgttgatagaatgttggccaagtcggcgccggacgagatg
gatccctcaaggggcgaacaacaggggcatcctgtcattaggacgctgtatgaccacatg
gaggaggtcacttgtctggagttccaccctaaggagcccattttggtgtcagggtcgaag
gacaacacgattaagatgtttgatatctcgaaagccagcgtcaagaaggcgtttaaaaca
atatctgagtcggaaccaatcagagccatgtctttccaccccgggggcgaccacatgatc
gtcgccaccaaccaccccgtcgtccgactgtatgacgtcaataccctccaatgctacgtc
tgtgctttcccctcccaccaacacacccagagcgtcacttgtctcaaatggtcgcaagac
gcgcgagtttttgccacttgtagcaaagacggcaatattaaactttgggacgcggtctcg
aaccgttgcataaacacgtttcagaaagcacacgacggacttgaagtctgttcggtcgta
ttttcgaaaaacggcaaatatttgttatcgtcggggaaaaactcaatttgcaaattgtgg
gaactgacaacaagccggtgtttgattgcttatacgggagctgggacgaccggaaagcag
gaatatgaggctcaggctgtttttaatcacactgaggattacgtcctgtttcctgacgag
gcaacgacgtctttgtgtgcctggaattcgaggaatgcttcaaggaagcagttgatgtct
ttgggacacaatggggcggttagactcatagcgcacagccccacgcaggccgcctttctg
acctgctcggacgattttcgggccaggttttggtacagaagaaccccaacattataa

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