Tribolium castaneum (red flour beetle): 656845
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Entry
656845 CDS
T01046
Symbol
Nub
Name
(RefSeq) nubbin
KO
K09364
POU domain transcription factor, class 2
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tca03000
]
656845 (Nub)
03021 Transcription machinery [BR:
tca03021
]
656845 (Nub)
Transcription factors [BR:
tca03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
656845 (Nub)
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
656845 (Nub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
VID27
Motif
Other DBs
NCBI-GeneID:
656845
NCBI-ProteinID:
XP_015834948
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All DBs
Position
LG4:complement(1606537..1654172)
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AA seq
649 aa
AA seq
DB search
MKISNLADFKSDTVRRWVESNPSPTLQNLDTPKSAKNNNNNNTIEFWHRQTADDMPMLLH
QPPSHVLLAGHETDQPLDFTMSKFKTKAATTVASQLKSFAAQQHMMLNGVYFNRNNNKGF
TRGSSPSSSSEEEGVGPPTEESPRSLPPSPAPRADELANSPVTPSGEKQYGKLWLNDPEM
PWRQELQVPSSEESKVALQTRLGLSPSEQRSITRMDKTPSTPPSNDDGDANGDISGDEHS
FTSERPGEHNDDNSMDSDRGGALNLVTSESEQPRASSPSSQVTSSSPGVNAALAALGGFS
YHLGVLGSLQAFQSPQGLQQLQQLAMLQQASGNPQAQFFLQNQGFLQGFPRSGLSSRPPH
SMQVQQIAQAAQQLQQLQKAQQQNSNQHNTSIPSNTQLPQTQTTPPNNSHIPASLLTPST
PSSGGLTPQHLKTPSRLLEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTLTNPGALSNPMTTPETIGRRR
KKRTSIETSVRVALEKAFVQNPKPTSEEISMLADGLCMEKEVVRVWFCNRRQKEKRINPP
AAAMGSPCSAGNPNGAMFAIANSLANSPLSLVTTSAHNNFNPNVMVKQE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatcgaatctggcggattttaaaagtgacacggtccggaggtgggtcgagtcg
aacccgtcacccaccctccagaacctcgacacccccaagtccgccaagaacaacaacaac
aacaacaccatcgagttctggcaccggcagaccgccgacgacatgcccatgttgctccac
cagccgccctcgcacgtcctcctcgccggccacgagaccgaccagcccctcgacttcacc
atgtccaagttcaagaccaaggcggcgaccacggtggcctcccagctcaagagcttcgcc
gcccagcagcacatgatgctcaacggggtgtactttaaccgcaacaacaacaagggtttc
acgcgcggctcgagtccgtcgagtagctccgaggaggagggcgtcgggccgccgacggag
gagtcccccaggtccctgccgccgagccccgcaccccgcgccgacgagctggcaaactct
ccggtgacaccgtcgggggagaagcaatacggcaaattatggctgaacgatcctgagatg
ccttggcggcaggagctgcaagtaccttcgagcgaggagtcgaaagtagcgctccagacc
agactgggcctctcgccaagtgagcagcgttcgataacacggatggacaagacgccttcg
acgccgccatcgaacgacgacggcgacgccaacggcgacatcagcggggacgagcacagc
ttcaccagcgagcgcccaggtgagcacaatgacgacaactcgatggactcagacaggggc
ggcgccctaaacctggtgactagcgagtccgagcagcctcgggcgtcctcccccagctcg
caggtgacgagttcgagtcccggggtgaacgctgctttggcggccctcggcggcttcagc
taccacttgggggtgttgggaagtctgcaggcttttcaaagtccgcaaggcctccaacaa
ctccaacaactcgcgatgctccagcaggccagcggaaacccacaagcgcaatttttttta
caaaaccaggggtttctgcaaggattcccccgatccggtctgtcttcgagaccaccgcat
tcgatgcaggtccaacaaatcgctcaagcggcccaacaactgcaacaactccaaaaggct
caacaacaaaattccaatcagcataacacgagtatcccatccaacacgcaattgccacaa
acgcaaaccacgccaccgaataattcgcacataccggccagtctactcactcccagcacc
cccagttcgggggggttgaccccccagcatttaaaaacgccctccaggctactcgaaccc
tcgccggaggaaaccaccgacctggaggagctcgaacagttcgccaaaacgttcaaacag
aggcgaatcaaactaggcttcacccagggcgacgtcggcctcgccatgggcaaactctac
ggcaacgacttctcccagacgacgatatcgcggttcgaagccttgaacttaagttttaaa
aacatgtgcaagttgaaaccgcttttgcaaaagtggctcgaagacgctgacagtacttta
acaaaccctggcgccttgagcaaccccatgaccacccccgagacgatcgggaggcggcgc
aagaagcggacgtcaatcgagaccagtgtccgcgtggcgctggagaaggcgttcgtgcag
aacccgaagcccaccagcgaggagatctccatgctggcggacggcctctgcatggagaag
gaggtggtgcgcgtgtggttctgcaaccggcggcagaaggagaagcggataaacccgccg
gcggcggcgatgggctcgccctgcagcgccggcaaccccaacggggccatgttcgccatc
gccaactcgctggccaacagccccctgtcgctggtcaccaccagcgcccacaacaacttc
aaccccaacgtgatggtcaagcaggaatga
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