Entry |
|
Name |
(RefSeq) HBS1-like protein
|
KO |
K14416 | elongation factor 1 alpha-like protein |
|
Organism |
tca Tribolium castaneum (red flour beetle)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tca00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
657404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tca03019]
657404
Messenger RNA biogenesis [BR:tca03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
657404
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG3:23286338..23304724
|
AA seq |
646 aa
MSRHRDVRNMDYSEDYDGYDDVYGHSVDDDYYISPSNRQFIYNRENSRDQPKIGEFIRTE
QDIQEEDESETASDLSDLDKARLESCIEQIKATLGPLCIPRNELVNIIISNNYNIERATN
AVLDDSKNLQSEPKEKVPSIKVVASGGKTTTNVTKGFDLSQNKDSIKLNTTPRSQSPASG
RGTPIISQSEGTSEETKIIKSKENKIDVETQYKKERGDSKEHLYMVVIGHVDAGKSTLMG
HLLYDLGQVNQKTMHKYEQESRKVGKQSFMYAWVLDETGEERNRGITMDVGRSQFETKSK
HVTLLDAPGHKDFIPNMISGAGQADVALLVVDATRGEFETGFDFGGQTREHALLVRSLGV
TQLAVAINKLDTVSWSKERFDDISQKLKVFLKQAGFREGDVTFVPCSGLTGQNLVDKPTE
NELLTWYNGPCLLEVIDNFRTPERPVSKPFRLSINDIFKGTGSGFCVSGRVETGSLNVGE
RVMVCPSRELSMVKSLYIEDLSQTVVFAGDQATVTLSGIEMQNVSIGNVLCDPQNPVQVS
AKFQARIVVFNLTIPITKGFSVILHHQSLVEPAVVSKLISQLNRSTGEVVKKHPRFLSNN
TSAIVEIQVSRPIALELYSDCKELGRFMLRVGGVTIAAGLITKIIL |
NT seq |
1941 nt +upstreamnt +downstreamnt
atgtctcgacatcgagatgttcgcaatatggattattccgaagactatgatggttatgac
gacgtttacggccattccgtcgacgatgattactatatttccccaagtaatcgacagttt
atctataatcgagagaactcacgagatcaaccaaaaattggcgagtttatccgcacggaa
caagacatccaagaggaagacgaatcagaaacggcgtcagatttgtcagatttagataag
gcaaggttggagtcttgcattgagcaaattaaagccactttgggccccttgtgcattcct
cgaaacgagttagtaaacataataatttcaaacaattacaacatcgaacgagccactaat
gcagtactggacgacagtaagaacctgcagagtgaaccgaaggaaaaagtgcccagcata
aaagtggtggcatcggggggtaaaacaaccacaaacgtcacaaaaggtttcgatcttagc
caaaataaggattccattaaactaaataccactccacgttcacaatcacctgcttctggt
cgaggaacaccgattatatctcagtctgaaggcacttcggaagaaacgaaaattattaaa
agtaaagaaaataaaattgatgttgaaacacaatacaaaaaggagagaggcgattcgaaa
gaacatctttatatggtggttattggtcacgtggatgctggaaaatcgactttgatgggg
cacttgctctatgacctaggacaggtgaatcaaaaaacaatgcacaaatatgaacaagag
agccgaaaggtgggtaaacaaagcttcatgtatgcgtgggttttggacgaaactggtgag
gaaagaaacagaggtataacgatggacgtcggccgttcccaattcgaaacaaaatcaaaa
catgtcacattacttgacgcccccggccacaaggatttcatccctaatatgatatcaggg
gcgggccaagctgacgttgctctacttgtagtggacgcaaccagaggtgaattcgagact
ggattcgatttcggtggtcaaacgcgagagcatgcacttcttgttagatcactaggagtc
actcaacttgctgtggccatcaacaaattggatacggtttcgtggtccaaagaacgattt
gatgatatctcacaaaaattgaaagtttttctcaaacaagctgggtttagggaaggcgat
gttacgtttgttccttgtagtgggttgactgggcaaaatttggtcgacaaaccgacggaa
aacgagcttttgacttggtacaacgggccttgtttattggaagtgatcgataatttccgt
actcccgaacgcccagtctccaaaccgttccgcctatccatcaatgacattttcaaaggg
actggttctggattttgtgtatcaggtcgggttgaaacgggcagtttgaatgtaggagag
cgggtcatggtgtgccccagtcgcgaactctcaatggtcaaatcgctctacatcgaagat
ttatcacaaacggtggtttttgccggagaccaagccactgttactttatccggtattgaa
atgcaaaatgtttccattggaaacgtgctctgcgaccctcagaaccccgtccaagtgtcg
gccaagttccaggcaaggattgttgttttcaacttgactattccaataactaagggattt
tcggttattttacatcatcagtctttagtcgagccggcggtggttagtaaactgatatcg
cagctaaataggagtacaggggaagtggtgaagaaacatccgagatttttgagtaacaat
acaagtgctattgttgagattcaagtttcgaggcccattgcgcttgaactgtacagtgat
tgtaaggagctggggaggtttatgctgagggttggcggggttacgatagctgcaggactc
attacaaaaattatattgtag |