Tribolium castaneum (red flour beetle): 657404
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Entry
657404 CDS
T01046
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
657404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
657404
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
657404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
Ras
AAA_22
YfmQ
Motif
Other DBs
NCBI-GeneID:
657404
NCBI-ProteinID:
XP_008191365
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All DBs
Position
LG3:23286338..23304724
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AA seq
646 aa
AA seq
DB search
MSRHRDVRNMDYSEDYDGYDDVYGHSVDDDYYISPSNRQFIYNRENSRDQPKIGEFIRTE
QDIQEEDESETASDLSDLDKARLESCIEQIKATLGPLCIPRNELVNIIISNNYNIERATN
AVLDDSKNLQSEPKEKVPSIKVVASGGKTTTNVTKGFDLSQNKDSIKLNTTPRSQSPASG
RGTPIISQSEGTSEETKIIKSKENKIDVETQYKKERGDSKEHLYMVVIGHVDAGKSTLMG
HLLYDLGQVNQKTMHKYEQESRKVGKQSFMYAWVLDETGEERNRGITMDVGRSQFETKSK
HVTLLDAPGHKDFIPNMISGAGQADVALLVVDATRGEFETGFDFGGQTREHALLVRSLGV
TQLAVAINKLDTVSWSKERFDDISQKLKVFLKQAGFREGDVTFVPCSGLTGQNLVDKPTE
NELLTWYNGPCLLEVIDNFRTPERPVSKPFRLSINDIFKGTGSGFCVSGRVETGSLNVGE
RVMVCPSRELSMVKSLYIEDLSQTVVFAGDQATVTLSGIEMQNVSIGNVLCDPQNPVQVS
AKFQARIVVFNLTIPITKGFSVILHHQSLVEPAVVSKLISQLNRSTGEVVKKHPRFLSNN
TSAIVEIQVSRPIALELYSDCKELGRFMLRVGGVTIAAGLITKIIL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacatcgagatgttcgcaatatggattattccgaagactatgatggttatgac
gacgtttacggccattccgtcgacgatgattactatatttccccaagtaatcgacagttt
atctataatcgagagaactcacgagatcaaccaaaaattggcgagtttatccgcacggaa
caagacatccaagaggaagacgaatcagaaacggcgtcagatttgtcagatttagataag
gcaaggttggagtcttgcattgagcaaattaaagccactttgggccccttgtgcattcct
cgaaacgagttagtaaacataataatttcaaacaattacaacatcgaacgagccactaat
gcagtactggacgacagtaagaacctgcagagtgaaccgaaggaaaaagtgcccagcata
aaagtggtggcatcggggggtaaaacaaccacaaacgtcacaaaaggtttcgatcttagc
caaaataaggattccattaaactaaataccactccacgttcacaatcacctgcttctggt
cgaggaacaccgattatatctcagtctgaaggcacttcggaagaaacgaaaattattaaa
agtaaagaaaataaaattgatgttgaaacacaatacaaaaaggagagaggcgattcgaaa
gaacatctttatatggtggttattggtcacgtggatgctggaaaatcgactttgatgggg
cacttgctctatgacctaggacaggtgaatcaaaaaacaatgcacaaatatgaacaagag
agccgaaaggtgggtaaacaaagcttcatgtatgcgtgggttttggacgaaactggtgag
gaaagaaacagaggtataacgatggacgtcggccgttcccaattcgaaacaaaatcaaaa
catgtcacattacttgacgcccccggccacaaggatttcatccctaatatgatatcaggg
gcgggccaagctgacgttgctctacttgtagtggacgcaaccagaggtgaattcgagact
ggattcgatttcggtggtcaaacgcgagagcatgcacttcttgttagatcactaggagtc
actcaacttgctgtggccatcaacaaattggatacggtttcgtggtccaaagaacgattt
gatgatatctcacaaaaattgaaagtttttctcaaacaagctgggtttagggaaggcgat
gttacgtttgttccttgtagtgggttgactgggcaaaatttggtcgacaaaccgacggaa
aacgagcttttgacttggtacaacgggccttgtttattggaagtgatcgataatttccgt
actcccgaacgcccagtctccaaaccgttccgcctatccatcaatgacattttcaaaggg
actggttctggattttgtgtatcaggtcgggttgaaacgggcagtttgaatgtaggagag
cgggtcatggtgtgccccagtcgcgaactctcaatggtcaaatcgctctacatcgaagat
ttatcacaaacggtggtttttgccggagaccaagccactgttactttatccggtattgaa
atgcaaaatgtttccattggaaacgtgctctgcgaccctcagaaccccgtccaagtgtcg
gccaagttccaggcaaggattgttgttttcaacttgactattccaataactaagggattt
tcggttattttacatcatcagtctttagtcgagccggcggtggttagtaaactgatatcg
cagctaaataggagtacaggggaagtggtgaagaaacatccgagatttttgagtaacaat
acaagtgctattgttgagattcaagtttcgaggcccattgcgcttgaactgtacagtgat
tgtaaggagctggggaggtttatgctgagggttggcggggttacgatagctgcaggactc
attacaaaaattatattgtag
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