KEGG   Tribolium castaneum (red flour beetle): 657404
Entry
657404            CDS       T01046                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    657404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    657404
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     657404
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 HBS1_N MMR_HSR1 Ras AAA_22 YfmQ
Other DBs
NCBI-GeneID: 657404
NCBI-ProteinID: XP_008191365
LinkDB
Position
LG3:23286338..23304724
AA seq 646 aa
MSRHRDVRNMDYSEDYDGYDDVYGHSVDDDYYISPSNRQFIYNRENSRDQPKIGEFIRTE
QDIQEEDESETASDLSDLDKARLESCIEQIKATLGPLCIPRNELVNIIISNNYNIERATN
AVLDDSKNLQSEPKEKVPSIKVVASGGKTTTNVTKGFDLSQNKDSIKLNTTPRSQSPASG
RGTPIISQSEGTSEETKIIKSKENKIDVETQYKKERGDSKEHLYMVVIGHVDAGKSTLMG
HLLYDLGQVNQKTMHKYEQESRKVGKQSFMYAWVLDETGEERNRGITMDVGRSQFETKSK
HVTLLDAPGHKDFIPNMISGAGQADVALLVVDATRGEFETGFDFGGQTREHALLVRSLGV
TQLAVAINKLDTVSWSKERFDDISQKLKVFLKQAGFREGDVTFVPCSGLTGQNLVDKPTE
NELLTWYNGPCLLEVIDNFRTPERPVSKPFRLSINDIFKGTGSGFCVSGRVETGSLNVGE
RVMVCPSRELSMVKSLYIEDLSQTVVFAGDQATVTLSGIEMQNVSIGNVLCDPQNPVQVS
AKFQARIVVFNLTIPITKGFSVILHHQSLVEPAVVSKLISQLNRSTGEVVKKHPRFLSNN
TSAIVEIQVSRPIALELYSDCKELGRFMLRVGGVTIAAGLITKIIL
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtctcgacatcgagatgttcgcaatatggattattccgaagactatgatggttatgac
gacgtttacggccattccgtcgacgatgattactatatttccccaagtaatcgacagttt
atctataatcgagagaactcacgagatcaaccaaaaattggcgagtttatccgcacggaa
caagacatccaagaggaagacgaatcagaaacggcgtcagatttgtcagatttagataag
gcaaggttggagtcttgcattgagcaaattaaagccactttgggccccttgtgcattcct
cgaaacgagttagtaaacataataatttcaaacaattacaacatcgaacgagccactaat
gcagtactggacgacagtaagaacctgcagagtgaaccgaaggaaaaagtgcccagcata
aaagtggtggcatcggggggtaaaacaaccacaaacgtcacaaaaggtttcgatcttagc
caaaataaggattccattaaactaaataccactccacgttcacaatcacctgcttctggt
cgaggaacaccgattatatctcagtctgaaggcacttcggaagaaacgaaaattattaaa
agtaaagaaaataaaattgatgttgaaacacaatacaaaaaggagagaggcgattcgaaa
gaacatctttatatggtggttattggtcacgtggatgctggaaaatcgactttgatgggg
cacttgctctatgacctaggacaggtgaatcaaaaaacaatgcacaaatatgaacaagag
agccgaaaggtgggtaaacaaagcttcatgtatgcgtgggttttggacgaaactggtgag
gaaagaaacagaggtataacgatggacgtcggccgttcccaattcgaaacaaaatcaaaa
catgtcacattacttgacgcccccggccacaaggatttcatccctaatatgatatcaggg
gcgggccaagctgacgttgctctacttgtagtggacgcaaccagaggtgaattcgagact
ggattcgatttcggtggtcaaacgcgagagcatgcacttcttgttagatcactaggagtc
actcaacttgctgtggccatcaacaaattggatacggtttcgtggtccaaagaacgattt
gatgatatctcacaaaaattgaaagtttttctcaaacaagctgggtttagggaaggcgat
gttacgtttgttccttgtagtgggttgactgggcaaaatttggtcgacaaaccgacggaa
aacgagcttttgacttggtacaacgggccttgtttattggaagtgatcgataatttccgt
actcccgaacgcccagtctccaaaccgttccgcctatccatcaatgacattttcaaaggg
actggttctggattttgtgtatcaggtcgggttgaaacgggcagtttgaatgtaggagag
cgggtcatggtgtgccccagtcgcgaactctcaatggtcaaatcgctctacatcgaagat
ttatcacaaacggtggtttttgccggagaccaagccactgttactttatccggtattgaa
atgcaaaatgtttccattggaaacgtgctctgcgaccctcagaaccccgtccaagtgtcg
gccaagttccaggcaaggattgttgttttcaacttgactattccaataactaagggattt
tcggttattttacatcatcagtctttagtcgagccggcggtggttagtaaactgatatcg
cagctaaataggagtacaggggaagtggtgaagaaacatccgagatttttgagtaacaat
acaagtgctattgttgagattcaagtttcgaggcccattgcgcttgaactgtacagtgat
tgtaaggagctggggaggtttatgctgagggttggcggggttacgatagctgcaggactc
attacaaaaattatattgtag

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