Tribolium castaneum (red flour beetle): 657474
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Entry
657474 CDS
T01046
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
657474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
657474
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
657474
mRNA cycle factors
Common to processing body (P body) and stress granule
657474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
SR-25
TPR_2
TPR_7
TPR_8
TPR_10
Motif
Other DBs
NCBI-GeneID:
657474
NCBI-ProteinID:
XP_015832940
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Position
LG2:complement(15222579..15225999)
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AA seq
855 aa
AA seq
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MGYKAAVQILKQAEDLKTKVLKKSDLLSDSQAWTDQQKLQNIYHQALVLDLEYALDKKVE
QDLWNIGFKNHISVLQELTRDKKNVRRSECQALLTWCLEAASGFYLTLLHELCNVYDIDL
PFRRRGNVYGETNSNELNLPQSSSCVYICQYCLVHLGDIARYRNQRKQAENFYKQAILVS
PTSGHPYNQLALLEASQGDKLSTVFYYIRGIAVKNPFPASTTNLLSTLSSSLDKESPLEK
IHSKITVTEFIQIFLCTHALLHTATDLNQAEVGVKSLNTTMTALVATQSFTREKLIKITA
INLYALKHVTSTSLTDELTEDEKIVRQQILDLLAGSLSAFLIPVHTLKNDESLLDYYALP
AVKLLTYWIMNESEILNEVVFTNRLQIWPSLCKLLNNVQQYMKNFDYTKYANVPLFEDKL
LQGFRPLIKNFKELDFKAGVEDEKTDNLIRMQRLIDFGLFISKLDVNHTKLITTSTESDL
INFEPGCIQPDPTNDLLEEMKSFHVTDISTIPNKKGFEKRGGILKPQGSLEKSREERELL
SSGEQSLMSDLSNSSASSSSSKKDISKNKRSKQNIALQSIFKKLEENKQVKFKVEEKEKL
VTFDTKPSPFNPPLRTQSFNQNHPAFPIPPPPPPSQPDYLNTLRNVTKPPQPNSFVFPPK
TENPSMVPFQNNFNQRVYQFPGGNPYKMEETNSPWWPNTSQNYQQRPDSFVNYPFSNNMP
YVPDYNKTQNNQAAGDMFNSPWNTFGRTNLLESNMNYENLSMRQTMLKEATPPSRPVSLE
KKNSHDNFMQNPTTSPGYSLFNTNTWTPNLVGQLRNNKAQDNQVSHLPQHSLFTGQGPQS
LAQLLEQQQSQKNDV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgggttataaagcagctgttcaaattctaaaacaagccgaagacttaaaaaccaaggta
ttaaaaaaaagcgatttattatcggattcgcaagcatggacggaccaacagaaattgcaa
aatatttaccatcaagcattggtacttgatttggaatacgctctcgacaagaaagtggag
caagacttgtggaacattggttttaagaatcacatctcggtgttacaagagttgactcgc
gataaaaaaaacgtcagaagatctgaatgtcaggcacttttaacttggtgtttagaagcg
gcttctgggttttatttgacacttttgcacgaattgtgcaacgtatatgacattgattta
ccgttcagaagacgcggaaatgtttatggggaaacaaattcaaatgaactcaatttgcct
caatcgtcctcctgtgtgtacatttgccaatactgcttggtacatttgggagatattgca
cgttatagaaaccaaagaaagcaagctgaaaatttttacaagcaagcaattttagtttct
ccaactagtggtcatccttacaatcagttggctcttttggaggcaagtcaaggtgataaa
ttatcaactgtcttttattacattaggggcattgctgtgaaaaatcccttcccagcatcc
accactaatctattaagcactttaagttcgtcgcttgataaagaaagtccattagaaaaa
attcacagtaaaataacggtaaccgagtttattcaaatttttttgtgcactcacgccctc
ttgcacactgccaccgatttaaaccaagctgaagtcggggttaaaagtttaaatacaaca
atgacagctttagtagcgactcaaagttttacaagagagaaattaataaaaattactgcg
attaatttgtacgctttaaaacatgtaacttcaacatcactcactgatgaattaaccgaa
gatgaaaaaattgtcagacaacaaattttggatttgttggctgggtctttgagcgcgttt
cttattccagttcatacgctaaaaaatgacgaaagcttgttggattattacgcacttcct
gcagtgaaacttttaacatattggattatgaacgaatcggaaattcttaacgaagttgtt
tttactaatcggttgcaaatttggcccagtttgtgcaaacttttgaataacgtacagcaa
tacatgaaaaactttgactacaccaaatatgccaatgtgcctctgtttgaagataaattg
ttgcaaggctttcggcctttgataaaaaatttcaaagagttggattttaaggcgggtgtc
gaggatgaaaaaactgataatttaatccgaatgcagcgtttgattgattttggtttattt
atcagcaagttggatgtgaatcatacgaaattaattacgacaagtaccgaaagtgattta
attaattttgaacctggatgcattcagccagacccaactaatgacttattggaggaaatg
aaatcatttcatgtcactgatatttcaacaattcctaataaaaaaggttttgaaaaacgg
ggcggtattttaaaaccacaaggttccttggaaaaatcgcgcgaagaacgcgaattatta
tcatcgggagaacaaagtctcatgtccgatttaagtaattcaagtgcgtcctcaagtagt
agcaaaaaagacatttcaaaaaataaacgatccaagcaaaacattgctctgcagtcgatt
tttaaaaaactggaagagaataaacaggtgaaatttaaagttgaagaaaaagaaaaattg
gtgacttttgacacaaagccttctccgtttaatccccctttgcgaacccaatccttcaac
cagaaccatccagctttccctattcctcctcctcctcctcccagccaacctgattacctc
aatactctccggaacgtaacgaaacctccacagccaaattcatttgttttccctcccaaa
actgagaatccatcaatggttccatttcaaaataatttcaatcagcgtgtctatcaattt
cccgggggaaacccctacaaaatggaggaaacgaattcgccttggtggcccaacacgtca
cagaattaccaacaacgacctgatagtttcgtaaattatccctttagcaataatatgccc
tatgtgcccgattataataagacgcaaaataatcaagcagccggcgatatgtttaattca
ccatggaatacttttggaaggactaacttacttgaaagcaacatgaattatgaaaatttg
tcgatgagacagacgatgcttaaagaggcgacaccaccttcaagacctgtaagtttggag
aaaaaaaatagtcatgataatttcatgcaaaatcccacaacatctcctggttattcattg
tttaataccaacacttggacgccgaatttagttggacagttgaggaataacaaggcacag
gataatcaagtgagtcatttgcctcaacattccttgtttactggacaaggaccccaatcg
ttagcccaattattggaacagcaacagtcgcaaaaaaatgatgtttag
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